Chemistry & Biology · 2015 · 79 citations · 52 references
Life SciencesBiochemistryMolecular BiologyEnzymologyMetabolic EngineeringProtein EngineeringBiocatalyst DiscoveryEnzyme-substrate RecognitionMacromolecular AssemblyMultienzyme ComplexesPolyketide BiosynthesisProtein Complex AssemblyAssembly Line BiosynthesisAssembly Line ProductionHost Strain EngineeringIterative SynthesisModular Polyketide BiosynthesisPolyketide Synthase EngineeringPolyketide Synthase Gene ClustersPolyketide Synthase Pathways
Conglobatin is an unusual C2-symmetrical macrodiolide from the bacterium Streptomyces conglobatus with promising antitumor activity. Insights into the genes and enzymes that govern both the assembly-line production of the conglobatin polyketide and its dimerization are essential to allow rational alterations to be made to the conglobatin structure. We have used a rapid, direct in vitro cloning method to obtain the entire cluster on a 41-kbp fragment, encoding a modular polyketide synthase assembly line. The cloned cluster directs conglobatin biosynthesis in a heterologous host strain. Using a model substrate to mimic the conglobatin monomer, we also show that the conglobatin cyclase/thioesterase acts iteratively, ligating two monomers head-to-tail then re-binding the dimer product and cyclizing it. Incubation of two different monomers with the cyclase produces hybrid dimers and trimers, providing the first evidence that conglobatin analogs may in future become accessible through engineering of the polyketide synthase.
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Enzymatic assembly of DNA molecules up to several hundred kilobases
Daniel G. Gibson, Lei Young, Ray-Yuan Chuang et al. · Nature Methods · 2009 · 10.9K citations
NRPSpredictor2—a web server for predicting NRPS adenylation domain specificity
Marc Röttig, Marnix H. Medema, Kai Blin et al. · Nucleic Acids Research · 2011 · 631 citations · Full text