Concepedia

Pathway Analysis

Pathway analysis is a bioinformatic method that interprets high-throughput omics data by contextualizing altered genes and proteins within biological pathways to elucidate the molecular mechanisms underlying experimental or pathological phenotypes.

5.7K

Publications

522K

Citations

43.6K

Authors

5.5K

Institutions

Publications per year

2017–2026

3K

Parents

Children

Publications

5.7K

GSVA: gene set variation analysis for microarray and RNA-Seq data

Sonja Hänzelmann, Robert Castelo, Justin Guinney · BMC Bioinformatics · 2013 · 16.5K citations · Full text

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Metascape provides a biologist-oriented resource for the analysis of systems-level datasets

Yingyao Zhou, Bin Zhou, Lars Pache et al. · Nature Communications · 2019 · 15.6K citations · Full text

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KEGG: new perspectives on genomes, pathways, diseases and drugs

Minoru Kanehisa, Miho Furumichi, Mao Tanabe et al. · Nucleic Acids Research · 2016 · 9.4K citations · Full text

, , +17

KEGG as a reference resource for gene and protein annotation

Minoru Kanehisa, Yoko Sato, Masayuki Kawashima et al. · Nucleic Acids Research · 2015 · 7.9K citations · Full text

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KEGG for linking genomes to life and the environment

Minoru Kanehisa, Michihiro Araki, Susumu Goto et al. · Nucleic Acids Research · 2007 · 7.1K citations · Full text

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1–5 of 5.7K

Authors

43.6K

  1. PD
    Peter D. Karp

    SRI International, United States

    41 publications · 15K citations

    32

    h-index

  2. LS
    Lincoln Stein

    Ontario Institute for Cancer Research, Canada

    32 publications · 24.9K citations

    25

    h-index

  3. MK
    Minoru Kanehisa

    Kyoto University, Japan

    27 publications · 47.7K citations

    24

    h-index

  4. SP
    Suzanne Paley

    SRI International, United States

    28 publications · 12.6K citations

    24

    h-index

  5. PD
    Peter D’Eustachio

    New York University, United States

    29 publications · 24.1K citations

    23

    h-index

1–5 of 43.6K

Institutions

5.5K

  1. Harvard University

    Cambridge, United States

    67 h-index

    714 publications

    95.9K citations

  2. University of Toronto

    Toronto, Canada

    54 h-index

    495 publications

    295K citations

  3. Chinese Academy of Sciences

    Beijing, China

    46 h-index

    351 publications

    40.6K citations

  4. National Institutes of Health

    Bethesda, United States

    44 h-index

    405 publications

    83.1K citations

  5. University of California San Diego

    San Diego, United States

    44 h-index

    370 publications

    67.7K citations

  6. Inserm

    Paris, France

    43 h-index

    430 publications

    102.4K citations

  7. Stanford University

    Stanford, United States

    42 h-index

    329 publications

    87.9K citations

  8. European Bioinformatics Institute

    Cambridge, United Kingdom

    40 h-index

    365 publications

    257.3K citations

1–8 of 5.5K

Venues

  1. Nucleic Acids Research

    226 publications · 143.9K citations

    116

    h-index

  2. Bioinformatics

    299 publications · 44.9K citations

    76

    h-index

  3. BMC Bioinformatics

    186 publications · 33K citations

    58

    h-index

  4. PLoS ONE

    234 publications · 10.9K citations

    56

    h-index

  5. Scientific Reports

    194 publications · 8.9K citations

    49

    h-index

1–5

See also

Pathway Analysis

Core Methods

Applications

Data Inputs

Limitations

Evaluation