Concepedia

Genome Alignment

Genome Alignment is a computational method in comparative genomics that identifies homologous regions across two or more genomes by establishing positional correspondences, distinguishing it from other sequence comparison techniques through its focus on large-scale structural and functional conservation at the whole-genome level.

1.8K

Publications

524.8K

Citations

9.6K

Authors

2K

Institutions

Publications per year

2017–2026

490

Variants

Whole Genome Alignment

Parents

Children

Publications

1.8K

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

, , +17

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations

, , +11

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 30.4K citations · Full text

, , +14

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead, Cole Trapnell, Mihai Pop et al. · Genome biology · 2009 · 23K citations · Full text

, , +15

Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype

Daehwan Kim, Joseph M. Paggi, Chanhee Park et al. · Nature Biotechnology · 2019 · 15.7K citations · Full text

, , +12

1–5 of 1.8K

Authors

9.6K

  1. WM
    Webb Miller

    Pennsylvania State University, United States

    25 publications · 10.7K citations

    20

    h-index

  2. DH
    David Haussler

    University of California, Santa Cruz, United States

    22 publications · 12K citations

    20

    h-index

  3. SL
    Steven L. Salzberg

    Johns Hopkins University, United States

    19 publications · 127K citations

    17

    h-index

  4. BP
    Benedict Paten

    University of California, Santa Cruz, United States

    16 publications · 2.8K citations

    16

    h-index

  5. RC
    Ross C. Hardison

    Pennsylvania State University, United States

    16 publications · 3.9K citations

    15

    h-index

1–5 of 9.6K

Institutions

2K

  1. National Institutes of Health

    Bethesda, United States

    37 h-index

    189 publications

    60.5K citations

  2. Pennsylvania State University

    State College, United States

    37 h-index

    233 publications

    55.7K citations

  3. Wellcome Sanger Institute

    Cambridge, United Kingdom

    35 h-index

    208 publications

    790K citations

  4. Centre National de la Recherche Scientifique

    Paris, France

    34 h-index

    219 publications

    39.5K citations

  5. University of California, Berkeley

    Berkeley, United States

    34 h-index

    136 publications

    48.3K citations

  6. Howard Hughes Medical Institute

    Chevy Chase, United States

    31 h-index

    110 publications

    50.6K citations

  7. Stanford University

    Stanford, United States

    30 h-index

    147 publications

    48.7K citations

  8. Harvard University

    Cambridge, United States

    28 h-index

    92 publications

    42.9K citations

1–8 of 2K

Venues

  1. Bioinformatics

    166 publications · 157.4K citations

    67

    h-index

  2. Nucleic Acids Research

    90 publications · 39.7K citations

    55

    h-index

  3. Genome Research

    GR · 72 publications · 45.3K citations

    54

    h-index

  4. BMC Genomics

    53 publications · 3.4K citations

    31

    h-index

  5. BMC Bioinformatics

    77 publications · 5.3K citations

    30

    h-index

1–5