Concepedia

Core Genome Alignment

Core Genome Alignment is a computational method in comparative genomics that identifies and aligns the set of orthologous genes conserved across all members of a defined group of organisms, thereby distinguishing the shared genomic backbone from variable or accessory elements.

48

Publications

5.5K

Citations

257

Authors

127

Institutions

Publications per year

2017–2026

27

Parents

Publications

48

The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes

Todd J. Treangen, Brian Ondov, Sergey Koren et al. · Genome biology · 2014 · 1.7K citations · Full text

, , +17

GET_HOMOLOGUES, a Versatile Software Package for Scalable and Robust Microbial Pangenome Analysis

Bruno Contreras‐Moreira, Pablo Vinuesa · Applied and Environmental Microbiology · 2013 · 974 citations · Full text

, , +17

Whole Genome Phylogeny of Bacillus by Feature Frequency Profiles (FFP)

Aisuo Wang, Gavin Ash · Scientific Reports · 2015 · 516 citations · Full text

, , +17

chewBBACA: A complete suite for gene-by-gene schema creation and strain identification

Mickael Silva, Miguel P. Machado, Diogo Nuno Silva et al. · Microbial Genomics · 2018 · 419 citations · Full text

, , +14

Sequence organization of the human genome

Carl W. Schmid, Prescott L. Deininger · Cell · 1975 · 297 citations

, , +14

1–5 of 48

Authors

257

  1. TJ
    Todd J. Treangen

    Rice University, United States

    5 publications · 1.9K citations

    5

    h-index

  2. AM
    Adam M. Phillippy

    National Human Genome Research Institute, United States

    5 publications · 1.9K citations

    5

    h-index

  3. SK
    Sergey Koren

    National Human Genome Research Institute, United States

    3 publications · 1.8K citations

    3

    h-index

  4. BO
    Brian Ondov

    University of Maryland, College Park, United States

    3 publications · 1.8K citations

    3

    h-index

  5. EK
    Eddie Kim

    National Institutes of Health, United States

    2 publications · 90 citations

    2

    h-index

1–5 of 257

Institutions

127

  1. Centre National de la Recherche Scientifique

    Paris, France

    3 h-index

    8 publications

    262 citations

  2. Ben-Gurion University of the Negev

    Beersheba, Israel

    2 h-index

    2 publications

    519 citations

  3. University of Lisbon

    Lisbon, Portugal

    2 h-index

    12 publications

    3.1K citations

  4. Colombian Corporation for Agricultural Research - AGROSAVIA

    Mosquera, Colombia

    2 h-index

    6 publications

    189 citations

  5. Sorbonne Université

    Paris, France

    2 h-index

    8 publications

    198 citations

  6. National Institute for Basic Biology

    Okazaki, Japan

    2 h-index

    5 publications

    195 citations

  7. UiT The Arctic University of Norway

    Tromsø, Norway

    2 h-index

    8 publications

    278 citations

  8. National Institutes of Natural Sciences

    Tokyo, Japan

    2 h-index

    5 publications

    195 citations

1–8 of 127

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 6 publications · 182 citations

    6

    h-index

  2. Parasitology Today

    3 publications · 66 citations

    3

    h-index

  3. BMC Genomics

    3 publications · 104 citations

    3

    h-index

  4. 2

    h-index

  5. Infection Genetics and Evolution

    2 publications · 46 citations

    2

    h-index

1–5