Miguel P. Machado

chewBBACA: A complete suite for gene-by-gene schema creation and strain identification

Mickael Silva, Miguel P. Machado, Diogo Nuno Silva et al. · Microbial Genomics · 2018 · 419 citations · Full text

Life Sciences, Bioinformatics, Microbiology +14

chewBBACA: A complete suite for gene-by-gene schema creation and strain identification

Mickael Silva, Miguel P. Machado, Diogo Nuno Silva et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2017 · 100 citations · Full text

Life Sciences, Bioinformatics, Microbiology +14

INNUENDO: A cross‐sectoral platform for the integration of genomics in the surveillance of food‐borne pathogens

Ann‐Katrin Llarena, Bruno Ribeiro-Gonçalves, Diogo Nuno Silva et al. · EFSA Supporting Publications · 2018 · 99 citations · Full text

Veterinary Medicine, Microbiology, Veterinary Microbiology +17

Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens

Natacha Couto, Leonard Schuele, Erwin C. Raangs et al. · Scientific Reports · 2018 · 67 citations · Full text

Life Sciences, Microbiology, Genomics +15

Insights into the population structure and pan-genome of Haemophilus influenzae

Miguel Pinto, Aída González-Díaz, Miguel P. Machado et al. · Infection Genetics and Evolution · 2018 · 61 citations

Life Sciences, Genetics, Microbiology +14