Concepedia

Computational Alignment Algorithms

Computational Alignment Algorithms is a computational methodology that distinguishes itself by systematically identifying optimal correspondences between genomic sequences through algorithmic optimization of alignment scoring metrics under biologically informed constraints.

755

Publications

216.7K

Citations

2K

Authors

758

Institutions

Publications per year

2017–2026

117

Parents

Publications

755

MUSCLE: multiple sequence alignment with high accuracy and high throughput

R. C. Edgar · Nucleic Acids Research · 2004 · 46.5K citations · Full text

, , +13

Clustal W and Clustal X version 2.0

Mark Larkin, Gordon Blackshields, Nigel P. Brown et al. · Bioinformatics · 2007 · 29.1K citations · Full text

, , +7

Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega

Fabian Sievers, Andreas Wilm, David Dineen et al. · Molecular Systems Biology · 2011 · 16.2K citations · Full text

, , +7

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

R. C. Edgar · BMC Bioinformatics · 2004 · 9.4K citations · Full text

, , +13

A Greedy Algorithm for Aligning DNA Sequences

Zheng Zhang, Scott Schwartz, Lukas Wagner et al. · Journal of Computational Biology · 2000 · 5.6K citations

, , +14

1–5 of 755

Authors

2K

  1. WM
    Webb Miller

    Pennsylvania State University, United States

    22 publications · 11.5K citations

    19

    h-index

  2. LP
    Lior Pachter

    University of California, Berkeley, United States

    11 publications · 1.6K citations

    11

    h-index

  3. CN
    Cédric Notredame

    Centre for Genomic Regulation, Spain

    11 publications · 1.4K citations

    11

    h-index

  4. RC
    Ross C. Hardison

    Pennsylvania State University, United States

    11 publications · 2.1K citations

    11

    h-index

  5. BM
    Burkhard Morgenstern

    University of Göttingen, Germany

    11 publications · 1.2K citations

    11

    h-index

1–5 of 2K

Institutions

758

  1. Pennsylvania State University

    State College, United States

    24 h-index

    74 publications

    43.9K citations

  2. Stanford University

    Stanford, United States

    21 h-index

    74 publications

    21.7K citations

  3. University of California, Berkeley

    Berkeley, United States

    20 h-index

    59 publications

    17.5K citations

  4. University of California, Santa Cruz

    Santa Cruz, United States

    15 h-index

    57 publications

    41.4K citations

  5. University of Southern California

    Los Angeles, United States

    15 h-index

    33 publications

    3K citations

  6. National Institutes of Health

    Bethesda, United States

    14 h-index

    54 publications

    26.2K citations

  7. National Center for Biotechnology Information

    Bethesda, United States

    12 h-index

    30 publications

    15.4K citations

  8. The University of Tokyo

    Tokyo, Japan

    12 h-index

    26 publications

    3.8K citations

1–8 of 758

Venues

  1. Bioinformatics

    141 publications · 47.6K citations

    62

    h-index

  2. Nucleic Acids Research

    49 publications · 65.8K citations

    34

    h-index

  3. BMC Bioinformatics

    66 publications · 17.1K citations

    32

    h-index

  4. Computer applications in the biosciences

    CABIOS · 33 publications · 8.5K citations

    26

    h-index

  5. Journal of Computational Biology

    35 publications · 7.6K citations

    21

    h-index

1–5