Concepedia

Lior Pachter

LP

Statistics

Publications

186

Citations

87.1K

H-Index

73

Active since

1997

Affiliations

University of California, Berkeley(Current)

California Institute of Technology

Massachusetts Institute of Technology

University of Iceland

Howard Hughes Medical Institute

Lior Pachter is an author at University of California, Berkeley specializing in life sciences, genomics, and bioinformatics.

ORCID

Publications per year

1997–2025

186

Publications

186

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

Cole Trapnell, Brian A. Williams, Geo Pertea et al. · Nature Biotechnology · 2010 · 16.5K citations

, , +16

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

Cole Trapnell, Adam Roberts, Loyal A. Goff et al. · Nature Protocols · 2012 · 12.9K citations · Full text

, , +12

TopHat: discovering splice junctions with RNA-Seq

Cole Trapnell, Lior Pachter, Steven L. Salzberg · Bioinformatics · 2009 · 12.1K citations · Full text

, , +16

Near-optimal probabilistic RNA-seq quantification

Nicolas Bray, Harold Pimentel, Páll Melsted et al. · Nature Biotechnology · 2016 · 11K citations · Full text

, , +6

Differential analysis of gene regulation at transcript resolution with RNA-seq

Cole Trapnell, David G. Hendrickson, Martin Sauvageau et al. · Nature Biotechnology · 2012 · 3.7K citations · Full text

, , +16

1–5 of 186