Harold Pimentel - Concepedia

Author

Harold Pimentel

University of California, Berkeley ORCID

Also Known As

Colombo R., Anthony, H Pimentel, Harold Pimentel, Pimentel, Harold, Tyler E. Dietterich

Publications

41.1K

Citations

H-Index

Concepts

All Affiliations

University of California, Berkeley Innovative Genomics Institute Stanford University University of Iceland Broad Institute

About

Harold Pimentel is an author at University of California, Berkeley specializing in medicine, genetics, and functional genomics.

Top Concepts

#	Concept	H-Index	Publications	Citations
1	Medicine	10	10	38.5K
2	Engineering	6	6	12.2K
3	Natural Sciences	3	3	26.2K
4	Public Health	1	1	76
5	Biology	1	1	16

Harold Pimentel

Publications

40.6K

Citations

H-Index

Page 1

	Year	Citations
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions Daehwan Kim, Geo Pertea, Cole Trapnell, Genome biology BioinformaticsGene Sequence AnnotationNatural SciencesGeneticsSequence Analysis	2013	13.4K
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks Cole Trapnell, Adam Roberts, Loyal A. Goff, Nature Protocols Differential GeneNatural SciencesGeneticsRna BiologyMolecular Biology	2012	12.6K
Near-optimal probabilistic RNA-seq quantification Nicolas Bray, Harold Pimentel, Páll Melsted, Nature Biotechnology Functional GenomicsEngineeringGeneticsRna Structure PredictionComputational Biology	2016	10.4K
Differential analysis of RNA-seq incorporating quantification uncertainty Harold Pimentel, Nicolas Bray, Suzette Puente, Nature Methods BioinformaticsSystems BiologyEngineeringGeneticsRna Structure Prediction	2017	1.6K
Identification of novel transcripts in annotated genomes using RNA-Seq Adam Roberts, Harold Pimentel, Cole Trapnell, Bioinformatics	2011	1K
Intron retention is a source of neoepitopes in cancer Alicia Smart, Claire A. Margolis, Harold Pimentel, Nature Biotechnology	2018	312
A dynamic intron retention program enriched in RNA processing genes regulates gene expression during terminal erythropoiesis Harold Pimentel, Marilyn Parra, Sherry L. Gee, Nucleic Acids Research Iron MetabolismGeneticsMolecular GeneticsCluster AnalysisSplicing Variant	2015	202
Gene-level differential analysis at transcript-level resolution Lynn Yi, Harold Pimentel, Nicolas Bray, Genome biology	2018	166
Evolutionary Persistence of DNA Methylation for Millions of Years after Ancient Loss of a De Novo Methyltransferase Sandra Catania, Phillip A. Dumesic, Harold Pimentel, Cell	2020	134
Near-optimal RNA-Seq quantification Nicolas Bray, Harold Pimentel, Páll Melsted, arXiv (Cornell University)	2015	127

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