Concepedia

Alignment Anchoring

Alignment Anchoring is a computational method in genome alignment that identifies highly conserved regions as fixed reference points to guide the pairwise or multiple sequence alignment process, thereby reducing complexity and improving accuracy by constraining the search space based on local homology.

26

Publications

1.8K

Citations

84

Authors

52

Institutions

Publications per year

2017–2026

8

Parents

Publications

26

Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes

Leslie A. Lyons, Thomas F. Laughlin, Neal G. Copeland et al. · Nature Genetics · 1997 · 365 citations

, , +15

MAVID: Constrained Ancestral Alignment of Multiple Sequences

Nicolas Bray, Lior Pachter · Genome Research · 2004 · 293 citations · Full text

, , +14

Fast and sensitive multiple alignment of large genomic sequences

Michael Brudno, Michael A. Chapman, Berthold Göttgens et al. · BMC Bioinformatics · 2003 · 199 citations · Full text

, , +10

<tt>andi</tt>: Fast and accurate estimation of evolutionary distances between closely related genomes

Bernhard Haubold, Fabian Klötzl, Peter Pfaffelhuber · Bioinformatics · 2014 · 131 citations · Full text

, , +17

CONREAL: Conserved Regulatory Elements Anchored Alignment Algorithm for Identification of Transcription Factor Binding Sites by Phylogenetic Footprinting

Eugène Berezikov, Victor Guryev, Ronald H.A. Plasterk et al. · Genome Research · 2003 · 97 citations · Full text

, , +15

1–5 of 26

Authors

84

  1. BM
    Burkhard Morgenstern

    University of Göttingen, Germany

    5 publications · 421 citations

    5

    h-index

  2. MB
    Michael Brudno

    University of Toronto, Canada

    3 publications · 334 citations

    3

    h-index

  3. YO
    Yasunori Osana

    Keio University, Japan

    2 publications · 73 citations

    2

    h-index

  4. KP
    Kris Popendorf

    Keio University, Japan

    2 publications · 73 citations

    2

    h-index

  5. YS
    Yasubumi Sakakibara

    Keio University, Japan

    2 publications · 73 citations

    2

    h-index

1–5 of 84

Institutions

52

  1. University of Göttingen

    Göttingen, Germany

    4 h-index

    6 publications

    491 citations

  2. Bielefeld University

    Bielefeld, Germany

    3 h-index

    4 publications

    289 citations

  3. Stanford University

    Stanford, United States

    3 h-index

    4 publications

    533 citations

  4. University of California, Berkeley

    Berkeley, United States

    2 h-index

    3 publications

    601 citations

  5. Seikei University

    Musashino, Japan

    2 h-index

    5 publications

    184 citations

  6. Pennsylvania State University

    State College, United States

    2 h-index

    4 publications

    212 citations

  7. Keio University

    Tokyo, Japan

    2 h-index

    7 publications

    256 citations

  8. Baylor College of Medicine

    Houston, United States

    1 h-index

    2 publications

    40 citations

1–8 of 52

Venues

  1. Bioinformatics

    4 publications · 237 citations

    4

    h-index

  2. Genome Research

    GR · 2 publications · 390 citations

    2

    h-index

  3. Nature Genetics

    2 publications · 406 citations

    2

    h-index

  4. Journal of Computational Biology

    2 publications · 33 citations

    2

    h-index

  5. Optics Express

    1 publications · 25 citations

    1

    h-index

1–5