Science Immunology · 2020 · 59 citations · 51 references
Life SciencesDevelopmental BiologyImmunologyAdaptive ImmunityDevelopmental ImmunologyTranscriptional RegulationAdaptive Immune ResponsesB Cell DevelopmentImmune Gene RegulationLymphocyte DevelopmentT Cell BiologyT Cell DifferentiationCell Type-specific Enhancer ActivityCell-type-specific Transcription FactorsDevelopmental Regulatory ElementsE2a FunctionEnhancer ElementsEnhancersImmune Cell Lineage SpecificationLineage-specific Genes
Distinct enhancer modules drive expression of Rag genes during T and B cell development (see the related Focus by Wang and Rothenberg ).
51
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations
BLAST+: architecture and applications
Christiam Camacho, George Coulouris, Vahram Avagyan et al. · BMC Bioinformatics · 2009 · 23.2K citations · Full text
Circos: An information aesthetic for comparative genomics
Martin Krzywinski, Jacqueline E. Schein, İnanç Birol et al. · Genome Research · 2009 · 11.9K citations · Full text
MEME SUITE: tools for motif discovery and searching
Timothy L. Bailey, Mikael Bodén, Fabian A. Buske et al. · Nucleic Acids Research · 2009 · 11.5K citations · Full text