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An Engineered CRISPR-Cas9 Mouse Line for Simultaneous Readout of Lineage Histories and Gene Expression Profiles in Single Cells

Sarah Bowling, Duluxan Sritharan, Fernando G. Osorio, Maximilian Nguyen, Priscilla Cheung, Alejo Rodriguez-Fraticelli, Sachin Patel, Wei-Chien Yuan, Yuko Fujiwara, Bin E. Li,

Cell · 2020 · 342 citations · 49 references

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49

Comprehensive Integration of Single-Cell Data

Tim Stuart, Andrew Butler, Paul Hoffman et al. · Cell · 2019 · 16.9K citations · Full text

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EMBOSS: The European Molecular Biology Open Software Suite

Peter Rice, Ian Longden, Alan J. Bleasby · Trends in Genetics · 2000 · 9.9K citations

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PEAR: a fast and accurate Illumina Paired-End reAd mergeR

Jiajie Zhang, Kassian Kobert, Tomáš Flouri et al. · Bioinformatics · 2013 · 4.9K citations · Full text

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UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy

Tom Smith, Andreas Heger, Ian Sudbery · Genome Research · 2017 · 2.4K citations · Full text

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Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting

Tomáš Čermák, Erin Doyle, Michelle Christian et al. · Nucleic Acids Research · 2011 · 2.1K citations · Full text

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