Concepedia

Lineage Reconstruction

Lineage Reconstruction is the computational inference of evolutionary or developmental cell lineages from single-cell molecular profiles, distinguished by its aim to reconstruct the temporal and hierarchical relationships among cells within a biological system.

1.4K

Publications

163.3K

Citations

7.4K

Authors

1.6K

Institutions

Publications per year

2017–2026

671

Variants

Cell Lineage Reconstruction

Parents

Children

Publications

1.4K

The single-cell transcriptional landscape of mammalian organogenesis

Junyue Cao, Malte Spielmann, Xiaojie Qiu et al. · Nature · 2019 · 4.8K citations

, , +14

Post-embryonic cell lineages of the nematode, Caenorhabditis elegans

J.E. Sulston, H. Robert Horvitz · Developmental Biology · 1977 · 3.6K citations

, , +14

Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics

Kelly Street, Davide Risso, Russell B. Fletcher et al. · BMC Genomics · 2018 · 3.4K citations · Full text

, , +17

Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis

Jacob Levine, Erin F. Simonds, Sean C. Bendall et al. · Cell · 2015 · 2.6K citations · Full text

, , +14

A clonogenic common myeloid progenitor that gives rise to all myeloid lineages

Koichi Akashi, David Traver, Toshihiro Miyamoto et al. · Nature · 2000 · 2.6K citations

, , +12

1–5 of 1.4K

Authors

7.4K

  1. FJ
    Fabian J. Theis

    Helmholtz Zentrum München, Germany

    18 publications · 6.2K citations

    17

    h-index

  2. ZB
    Zhirong Bao

    Kettering University, United States

    10 publications · 597 citations

    11

    h-index

  3. JS
    Jay Shendure

    University of Washington, United States

    11 publications · 7.2K citations

    11

    h-index

  4. NY
    Nir Yosef

    University of California, Berkeley, United States

    10 publications · 4.8K citations

    10

    h-index

  5. ES
    Ehud Shapiro

    Weizmann Institute of Science, Israel

    9 publications · 584 citations

    10

    h-index

1–5 of 7.4K

Institutions

1.6K

  1. Harvard University

    Cambridge, United States

    53 h-index

    331 publications

    74.1K citations

  2. Howard Hughes Medical Institute

    Chevy Chase, United States

    50 h-index

    213 publications

    60.6K citations

  3. Stanford University

    Stanford, United States

    43 h-index

    408 publications

    120.9K citations

  4. University of Cambridge

    Cambridge, United Kingdom

    37 h-index

    180 publications

    64.6K citations

  5. University of Washington

    Seattle, United States

    36 h-index

    203 publications

    80.5K citations

  6. Centre National de la Recherche Scientifique

    Paris, France

    31 h-index

    211 publications

    26.4K citations

  7. Broad Institute

    Cambridge, United States

    29 h-index

    164 publications

    37.4K citations

  8. Yale University

    New Haven, United States

    28 h-index

    104 publications

    11.1K citations

1–8 of 1.6K

Venues

  1. Nature Communications

    53 publications · 5.1K citations

    39

    h-index

  2. Nature

    38 publications · 24.5K citations

    37

    h-index

  3. Cell

    37 publications · 13.2K citations

    34

    h-index

  4. Proceedings of the National Academy of Sciences

    PNAS · 36 publications · 3.7K citations

    30

    h-index

  5. Bioinformatics

    54 publications · 3.3K citations

    30

    h-index

1–5