Concepedia
Scientific Reports · 2017 · 70 citations · 53 references
Open access
53
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 66.2K citations · Full text
<tt>edgeR</tt> : a Bioconductor package for differential expression analysis of digital gene expression data
Mark D. Robinson, Davis J. McCarthy, Gordon K. Smyth · Bioinformatics · 2009 · 42.7K citations · Full text
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Yang Liao, Gordon K. Smyth, Wei Shi · Bioinformatics · 2013 · 27.4K citations · Full text
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
Daehwan Kim, Geo Pertea, Cole Trapnell et al. · Genome biology · 2013 · 13.4K citations · Full text
Bioinformatics, Gene Sequence Annotation, Natural Sciences +14
The Orphan Nuclear Receptor RORγt Directs the Differentiation Program of Proinflammatory IL-17+ T Helper Cells
Ivaylo I. Ivanov, Brent S. McKenzie, Liang Zhou et al. · Cell · 2006 · 5K citations · Full text
Inflammation, Cytokine, Lymphocyte Development +9