Concepedia

Codon Optimality Is a Major Determinant of mRNA Stability

Vladimir Presnyak, Najwa Alhusaini, Ying-Hsin Chen, Sophie Martin, Nathan Morris, Nicholas Kline, Sara Olson, David E. Weinberg, Kristian E. Baker, Brenton R. Graveley,

Cell · 2015 · 1.1K citations · 36 references

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36

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead, Cole Trapnell, Mihai Pop et al. · Genome biology · 2009 · 23K citations · Full text

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

Cole Trapnell, Brian A. Williams, Geo Pertea et al. · Nature Biotechnology · 2010 · 16.5K citations

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Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling

Nicholas T. Ingolia, Sina Ghaemmaghami, J. Robert Newman et al. · Science · 2009 · 4.1K citations · Full text

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Open source clustering software

Michiel de Hoon, Seiya Imoto, John P. Nolan et al. · Bioinformatics · 2004 · 3.2K citations · Full text

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