Concepedia

Long-read Assembly

Long-Read Assembly is a genome assembly approach that reconstructs contiguous genomic sequences from long-read, single-molecule sequencing data, leveraging read lengths typically from tens to hundreds of kilobases to span repetitive and structurally complex regions that are difficult to resolve with short-read assemblies.

555

Publications

94.9K

Citations

3.5K

Authors

1.1K

Institutions

Publications per year

2017–2026

469

Variants

Long-read Genome Assembly

Parents

Children

Publications

555

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

Ryan R. Wick, Louise M. Judd, Claire L. Gorrie et al. · PLoS Computational Biology · 2017 · 8.8K citations · Full text

, , +15

Canu: scalable and accurate long-read assembly via adaptive <i>k</i> -mer weighting and repeat separation

Sergey Koren, Brian P. Walenz, Konstantin Berlin et al. · Genome Research · 2017 · 8.2K citations · Full text

, , +16

Assembly of long, error-prone reads using repeat graphs

Mikhail Kolmogorov, Jeffrey Yuan, Yu Lin et al. · Nature Biotechnology · 2019 · 6.3K citations

, , +13

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

Chen-Shan Chin, David H. Alexander, Patrick Marks et al. · Nature Methods · 2013 · 4.3K citations

, , +14

Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies

Arang Rhie, Brian P. Walenz, Sergey Koren et al. · Genome biology · 2020 · 3.5K citations · Full text

, , +17

1–5 of 555

Authors

3.5K

  1. SK
    Sergey Koren

    National Human Genome Research Institute, United States

    41 publications · 24.1K citations

    32

    h-index

  2. AM
    Adam M. Phillippy

    National Human Genome Research Institute, United States

    38 publications · 23.2K citations

    28

    h-index

  3. EE
    Evan E. Eichler

    University of Washington, United States

    22 publications · 9.9K citations

    21

    h-index

  4. CC
    Chen-Shan Chin

    Pacific Biosciences (United States), United States

    20 publications · 9.7K citations

    17

    h-index

  5. KH
    Kerstin Howe

    Wellcome Sanger Institute, United Kingdom

    18 publications · 8.7K citations

    16

    h-index

1–5 of 3.5K

Institutions

1.1K

  1. Pacific Biosciences (United States)

    Menlo Park, United States

    36 h-index

    151 publications

    91.2K citations

  2. National Human Genome Research Institute

    Bethesda, United States

    35 h-index

    126 publications

    75.4K citations

  3. Howard Hughes Medical Institute

    Chevy Chase, United States

    29 h-index

    64 publications

    20.5K citations

  4. University of California, Santa Cruz

    Santa Cruz, United States

    24 h-index

    144 publications

    54.7K citations

  5. Chinese Academy of Sciences

    Beijing, China

    24 h-index

    87 publications

    8.5K citations

  6. University of Washington

    Seattle, United States

    24 h-index

    114 publications

    32.9K citations

  7. Centre National de la Recherche Scientifique

    Paris, France

    23 h-index

    102 publications

    9.7K citations

  8. Wellcome Sanger Institute

    Cambridge, United Kingdom

    22 h-index

    134 publications

    81K citations

1–8 of 1.1K

Venues

  1. GigaScience

    43 publications · 4.5K citations

    32

    h-index

  2. Bioinformatics

    34 publications · 9.5K citations

    29

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 86 publications · 3.5K citations

    29

    h-index

  4. Genome Research

    GR · 22 publications · 12.7K citations

    20

    h-index

  5. BMC Genomics

    26 publications · 1.8K citations

    19

    h-index

1–5