Concepedia

Assembly Evaluation

Assembly Evaluation is a systematic methodological framework within sequence assembly that assesses the accuracy, completeness, and structural fidelity of assembled genomic sequences by comparing them to reference genomes or leveraging intrinsic sequence features to quantify assembly quality.

132

Publications

38.5K

Citations

645

Authors

258

Institutions

Publications per year

2017–2026

46

Parents

Publications

132

QUAST: quality assessment tool for genome assemblies

Alexey Gurevich, Vladislav Saveliev, Nikolay Vyahhi et al. · Bioinformatics · 2013 · 11.5K citations · Full text

, , +14

Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies

Arang Rhie, Brian P. Walenz, Sergey Koren et al. · Genome biology · 2020 · 3.5K citations · Full text

, , +17

BUSCO: Assessing Genome Assembly and Annotation Completeness

Mathieu Seppey, Mosè Manni, Evgeny M. Zdobnov · Methods in molecular biology · 2019 · 2.4K citations · Full text

, , +14

Significantly improving the quality of genome assemblies through curation

Kerstin Howe, William Chow, Joanna Collins et al. · GigaScience · 2021 · 2K citations · Full text

, , +10

Versatile genome assembly evaluation with QUAST-LG

Alla Mikheenko, Andrey D. Prjibelski, Vladislav Saveliev et al. · Bioinformatics · 2018 · 1.6K citations · Full text

, , +16

1–5 of 132

Authors

645

  1. AM
    Adam M. Phillippy

    National Human Genome Research Institute, United States

    9 publications · 5.7K citations

    9

    h-index

  2. MC
    Michael C. Schatz

    Johns Hopkins University, United States

    7 publications · 3.3K citations

    7

    h-index

  3. SK
    Sergey Koren

    National Human Genome Research Institute, United States

    7 publications · 5.3K citations

    7

    h-index

  4. MP
    Mihai Pop

    University of Maryland, College Park, United States

    6 publications · 1.6K citations

    6

    h-index

  5. SL
    Steven L. Salzberg

    Johns Hopkins University, United States

    6 publications · 2.6K citations

    6

    h-index

1–5 of 645

Institutions

258

  1. University of Maryland, College Park

    College Park, United States

    10 h-index

    44 publications

    25.2K citations

  2. University of California, Berkeley

    Berkeley, United States

    8 h-index

    21 publications

    5.6K citations

  3. Wellcome Sanger Institute

    Cambridge, United Kingdom

    7 h-index

    38 publications

    25.8K citations

  4. Washington University in St. Louis

    St Louis, United States

    6 h-index

    27 publications

    1.5K citations

  5. Howard Hughes Medical Institute

    Chevy Chase, United States

    6 h-index

    14 publications

    9.6K citations

  6. Cold Spring Harbor Laboratory

    Cold Spring Harbor, United States

    5 h-index

    7 publications

    2.1K citations

  7. University of Washington

    Seattle, United States

    5 h-index

    11 publications

    5.1K citations

  8. National Institutes of Health

    Bethesda, United States

    5 h-index

    15 publications

    14.8K citations

1–8 of 258

Venues

  1. Bioinformatics

    15 publications · 16.6K citations

    15

    h-index

  2. Genome biology

    13 publications · 7K citations

    13

    h-index

  3. BMC Bioinformatics

    7 publications · 655 citations

    9

    h-index

  4. PLoS ONE

    6 publications · 480 citations

    6

    h-index

  5. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 5 publications · 207 citations

    5

    h-index

1–5