Concepedia

Diversity and characteristics of raw milk microbiota from Korean dairy farms using metagenomic and culturomic analysis

Sangdon Ryu, Won Seo Park, Bohyun Yun, Minhye Shin, Gwang‐woong Go, Jong Nam Kim, Sangnam Oh, Younghoon Kim

Food Control · 2021 · 40 citations · 43 references

DOI

Concepts

References

43

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes · PLoS ONE · 2013 · 22.5K citations · Full text

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Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

Patrick D. Schloss, Sarah L. Westcott, Thomas Ryabin et al. · Applied and Environmental Microbiology · 2009 · 21.8K citations · Full text

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Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB

Todd Z. DeSantis, Philip Hugenholtz, N. Larsen et al. · Applied and Environmental Microbiology · 2006 · 11.2K citations · Full text

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VSEARCH: a versatile open source tool for metagenomics

Torbjørn Rognes, Tomáš Flouri, Ben Nichols et al. · PeerJ · 2016 · 11K citations · Full text

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UniFrac: a New Phylogenetic Method for Comparing Microbial Communities

Catherine Lozupone, Rob Knight · Applied and Environmental Microbiology · 2005 · 8.6K citations · Full text

, , +16