Concepedia

Philip Hugenholtz

PH

Statistics

Publications

464

Citations

123.1K

H-Index

123

Active since

1965

Affiliations

The University of Queensland(Current)

Joint Genome Institute

Lawrence Berkeley National Laboratory

University of California, Davis

Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures

Philip Hugenholtz is an author at The University of Queensland specializing in life sciences, microbiology, and microbial ecology.

ORCID

Publications per year

1965–2025

464

Publications

464

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

Donovan H. Parks, Michael Imelfort, Connor T. Skennerton et al. · Genome Research · 2015 · 12.8K citations · Full text

, , +17

Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB

Todd Z. DeSantis, Philip Hugenholtz, N. Larsen et al. · Applied and Environmental Microbiology · 2006 · 11.2K citations · Full text

, , +17

GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database

Pierre-Alain Chaumeil, Aaron J. Mussig, Philip Hugenholtz et al. · Bioinformatics · 2019 · 5.5K citations · Full text

, , +17

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

Daniel McDonald, Morgan N. Price, Julia K. Goodrich et al. · The ISME Journal · 2011 · 5.3K citations · Full text

, , +17

STAMP: statistical analysis of taxonomic and functional profiles

Donovan H. Parks, Gene W. Tyson, Philip Hugenholtz et al. · Bioinformatics · 2014 · 4.3K citations · Full text

, , +12

1–5 of 464