Metagenomic Analysis

Metagenomic Analysis is a genomic data analysis approach that characterizes the collective genetic material recovered directly from environmental or clinical samples to infer the composition, diversity, and functional potential of microbial communities without requiring isolate cultivation.

8.3K

Publications

923.7K

Citations

42.8K

Authors

6.7K

Institutions

Publications per year

2017–2026

5.7K

Parents

Genomic Data Analysis

Children

Amplicon Sequence Variant AnalysisAmplicon Sequencing AnalysisClinical MetagenomicsDe Novo MetagenomicsGenome Reconstruction From MetagenomesHost Dna DepletionMetagenomic Database CurationMetagenomic NormalizationMetagenomic Pathway AnalysisReference-based Metagenomics

Publications

8.3K

Metagenomic biomarker discovery and explanation

Nicola Segata, Jacques Izard, Levi Waldron et al. · Genome biology · 2011 · 16.7K citations · Full text

Life Sciences, Bioinformatics, Microbiology +10

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

Donovan H. Parks, Michael Imelfort, Connor T. Skennerton et al. · Genome Research · 2015 · 12.8K citations · Full text

Life Sciences, Biology, Microbiology +17

A human gut microbial gene catalogue established by metagenomic sequencing

Junjie Qin, Ruiqiang Li, Jeroen Raes et al. · Nature · 2010 · 11.7K citations · Full text

Life Sciences, Genetics, Microbiology +17

VSEARCH: a versatile open source tool for metagenomics

Torbjørn Rognes, Tomáš Flouri, Ben Nichols et al. · PeerJ · 2016 · 11K citations · Full text

Life Sciences, Bioinformatics, Comparative Genomics +11

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

J. Gregory Caporaso, Christian L. Lauber, William A. Walters et al. · Proceedings of the National Academy of Sciences · 2010 · 10K citations

Life Sciences, Biology, Microbiology +14

1–5 of 8.3K

Authors

42.8K

RK
Rob Knight
University of California San Diego, United States
72 publications · 50K citations
52
h-index
NS
Nicola Segata
University of Trento, Italy
63 publications · 43.2K citations
51
h-index
CH
Curtis Huttenhower
Harvard University, United States
56 publications · 58.9K citations
47
h-index
TZ
Tong Zhang
University of Hong Kong, Hong Kong SAR China
64 publications · 11.1K citations
46
h-index
NC
Nikos C. Kyrpides
Joint Genome Institute, United States
54 publications · 19.4K citations
45
h-index

1–5 of 42.8K

Institutions

6.7K

1–8 of 6.7K

Venues

Microbiome
273 publications · 45.3K citations
106
h-index
PLoS ONE
358 publications · 36.8K citations
99
h-index
The ISME Journal
148 publications · 35.7K citations
91
h-index
Scientific Reports
268 publications · 21.3K citations
84
h-index
Frontiers in Microbiology
406 publications · 23.6K citations
80
h-index

1–5