Concepedia

Illumina MiSeq sequencing reveals microbial community succession in salted peppers with different salinity during preservation

Mengjuan Chen, Yeyou Qin, Fangming Deng, Hui Zhou, Rongrong Wang, Pao Li, Yang Liu, Liwen Jiang

Food Research International · 2021 · 36 citations · 32 references

DOI

Concepts

References

32

VSEARCH: a versatile open source tool for metagenomics

Torbjørn Rognes, Tomáš Flouri, Ben Nichols et al. · PeerJ · 2016 · 11K citations · Full text

, , +11

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

J. Gregory Caporaso, Christian L. Lauber, William A. Walters et al. · The ISME Journal · 2012 · 9.1K citations · Full text

, , +6

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

Nicholas A. Bokulich, Sathish Subramanian, Jeremiah J. Faith et al. · Nature Methods · 2012 · 4.4K citations · Full text

, , +10

Quantitative and Qualitative β Diversity Measures Lead to Different Insights into Factors That Structure Microbial Communities

Catherine Lozupone, Micah Hamady, Scott T. Kelley et al. · Applied and Environmental Microbiology · 2007 · 2.8K citations · Full text

, , +17

An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform

Douglas Fadrosh, Bing Ma, Pawel Gajer et al. · Microbiome · 2014 · 1.7K citations · Full text

, , +12