Concepedia

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

Nicholas A. Bokulich, Sathish Subramanian, Jeremiah J. Faith, Dirk Gevers, Jeffrey I. Gordon, Rob Knight, David A. Mills, J. Gregory Caporaso

Nature Methods · 2012 · 4.4K citations · 12 references

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12

Search and clustering orders of magnitude faster than BLAST

R. C. Edgar · Bioinformatics · 2010 · 21.7K citations · Full text

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Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy

Qiong Wang, George M Garrity, James M. Tiedje et al. · Applied and Environmental Microbiology · 2007 · 20.5K citations · Full text

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Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB

Todd Z. DeSantis, Philip Hugenholtz, N. Larsen et al. · Applied and Environmental Microbiology · 2006 · 11.2K citations · Full text

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Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

J. Gregory Caporaso, Christian L. Lauber, William A. Walters et al. · Proceedings of the National Academy of Sciences · 2010 · 10K citations

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Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

J. Gregory Caporaso, Christian L. Lauber, William A. Walters et al. · The ISME Journal · 2012 · 9.1K citations · Full text

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