Concepedia

Microbial Metagenomics

Microbial Metagenomics is a genomic approach that involves the direct sequencing and analysis of genetic material recovered from microbial communities in freshwater environments to characterize their taxonomic composition, functional potential, and ecological interactions without prior cultivation.

1.6K

Publications

146.4K

Citations

8.6K

Authors

2.2K

Institutions

Publications per year

2017–2026

1.1K

Parents

Publications

1.6K

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich, Sergey Nurk, Dmitry Antipov et al. · Journal of Computational Biology · 2012 · 27.2K citations

, , +17

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

Folker Meyer, Daniel Paarmann, M. D'Souza et al. · BMC Bioinformatics · 2008 · 3.6K citations · Full text

, , +15

Reagent and laboratory contamination can critically impact sequence-based microbiome analyses

Susannah J. Salter, Michael J. Cox, Elena M. Turek et al. · BMC Biology · 2014 · 3.5K citations · Full text

, , +17

Bracken: estimating species abundance in metagenomics data

Jennifer Lu, Florian P. Breitwieser, Peter Thielen et al. · PeerJ Computer Science · 2017 · 2.3K citations · Full text

, , +17

The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific

Douglas B. Rusch, Aaron L. Halpern, Granger Sutton et al. · PLoS Biology · 2007 · 2.1K citations · Full text

, , +17

1–5 of 1.6K

Authors

8.6K

  1. FR
    Francisco Rodríguez‐Valera

    Universitat de Miguel Hernández d'Elx, Spain

    30 publications · 3K citations

    26

    h-index

  2. JF
    Jillian F. Banfield

    University of California, Berkeley, United States

    28 publications · 5.4K citations

    23

    h-index

  3. RG
    Rohit Ghai

    Universitat de Miguel Hernández d'Elx, Spain

    24 publications · 2.7K citations

    21

    h-index

  4. SG
    Susannah G. Tringe

    Joint Genome Institute, United States

    22 publications · 6.5K citations

    21

    h-index

  5. KD
    Katherine D. McMahon

    University of Wisconsin–Madison, United States

    22 publications · 3.2K citations

    17

    h-index

1–5 of 8.6K

Institutions

2.2K

  1. Joint Genome Institute

    Berkeley, United States

    44 h-index

    258 publications

    80.4K citations

  2. Chinese Academy of Sciences

    Beijing, China

    42 h-index

    335 publications

    17.5K citations

  3. Lawrence Berkeley National Laboratory

    Berkeley, United States

    39 h-index

    213 publications

    86.3K citations

  4. University of California, Berkeley

    Berkeley, United States

    35 h-index

    187 publications

    62K citations

  5. Planetary Science Institute

    Tucson, United States

    30 h-index

    106 publications

    30.7K citations

  6. University of Hong Kong

    Pok Fu Lam, Hong Kong

    27 h-index

    99 publications

    7.4K citations

  7. Universitat de Miguel Hernández d'Elx

    Elche, Spain

    26 h-index

    89 publications

    9.5K citations

  8. University of Wisconsin–Madison

    Madison, United States

    26 h-index

    92 publications

    18.2K citations

1–8 of 2.2K

Venues

  1. Frontiers in Microbiology

    133 publications · 7.3K citations

    53

    h-index

  2. The ISME Journal

    56 publications · 8.8K citations

    46

    h-index

  3. PLoS ONE

    70 publications · 7.9K citations

    42

    h-index

  4. Environmental Microbiology

    69 publications · 4.6K citations

    41

    h-index

  5. Applied and Environmental Microbiology

    AEM · 61 publications · 4.6K citations

    41

    h-index

1–5