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Multimodal pooled Perturb-CITE-seq screens in patient models define mechanisms of cancer immune evasion

Chris J. Frangieh, Johannes C. Melms, Pratiksha I. Thakore, Patricia Ho, Adrienne Luoma, Brian Cleary, Shruti Malu, Michael S. Cuoco, Maryann Zhao, Casey R. Ager,

Nature Genetics · 2021 · 270 citations · 28 references

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28

Scikit-learn: Machine Learning in Python

Fabián Pedregosa, Gaël Varoquaux, Alexandre Gramfort et al. · arXiv (Cornell University) · 2012 · 63.7K citations · Full text

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SCANPY: large-scale single-cell gene expression data analysis

F. Alexander Wolf, Philipp Angerer, Fabian J. Theis · Genome biology · 2018 · 9.3K citations · Full text

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Simultaneous epitope and transcriptome measurement in single cells

Marlon Stoeckius, Christoph Hafemeister, William Stephenson et al. · Nature Methods · 2017 · 3.3K citations · Full text

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Mutations Associated with Acquired Resistance to PD-1 Blockade in Melanoma

Jesse M. Zaretsky, Ángel García-Díaz, Daniel Sanghoon Shin et al. · New England Journal of Medicine · 2016 · 3.2K citations · Full text

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Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens

Atray Dixit, Oren Parnas, Biyu Li et al. · Cell · 2016 · 1.9K citations · Full text

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