Comprehensive Integration of Single-Cell Data

Tim Stuart, Andrew Butler, Paul Hoffman, +7

Cell

EngineeringBiomedical Data IntegrationData ScienceSingle Cell SequencingMedicine +9

Integrated analysis of multimodal single-cell data

Yuhan Hao, Stephanie Hao, Erica Andersen‐Nissen, +22

Cell

Simultaneous epitope and transcriptome measurement in single cells

Marlon Stoeckius, Christoph Hafemeister, William Stephenson, +5

Nature Methods

Systems BiologySingle Cell SequencingMedicineOmicsCell Biology +6

Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics

Marlon Stoeckius, Shiwei Zheng, Brian Houck‐Loomis, +5

Genome biology

Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells

Eleni P. Mimitou, Anthony Cheng, Antonino Montalbano, +11

Nature Methods

Multiplexed DetectionSingle Cell SequencingMedicineNatural SciencesMolecular Biology +10

Integrated analysis of multimodal single-cell data

Yuhan Hao, Stephanie Hao, Erica Andersen‐Nissen, +22

EngineeringImmunologyMultiomicsImmune SystemTrajectory Analysis +19

Paternal Diet Defines Offspring Chromatin State and Intergenerational Obesity

Anita Öst, Adelheid Lempradl, Eduard Casas, +16

Cell

ObesityChromatinEpigenetic ChangeGeneticsIntergenerational Obesity +3

Comprehensive integration of single cell data

Tim Stuart, Andrew Butler, Paul Hoffman, +6

EngineeringSingle Cell TranscriptomicsGeneticsMultiomicsComprehensive Integration +25

A RORγt+ cell instructs gut microbiota-specific Treg cell differentiation

Ranit Kedmi, Tariq Ahmad Najar, Kailin R. Mesa, +20

Nature

Mucosal ImmunologyImmune Cell DevelopmentImmunologyRorγt+ Cell InstructsGut-organ Axis +5

Integration of whole transcriptome spatial profiling with protein markers

Nir Ben-Chetrit, Xiang Niu, Ariel D. Swett, +8

Nature Biotechnology

Functional GenomicsEngineeringMedicineGeneticsProtein Markers +6