PLoS ONE · 2017 · 11 citations · 41 references
Life SciencesBiologyMolecular BiologyComparative GenomicsMolecular EvolutionStructural BioinformaticsCellular Immune ResponsesHumoral Immune ResponsesHumoral ImmunityMammalian ImmunologyCandida Albicans InfectionConserved AntigensFungal Immune ResponsesHomologyNovel Antifungal TargetsStructural Basis Of AntigenicityStructural Epitope Similarity
The ubiquitously expressed 14-3-3 family of proteins is evolutionarily conserved from yeast to mammals. Their involvement in humoral and cellular immune responses is emerging through studies in drosophila and humans. In humans, a select group of 14-3-3 isoforms are antigenic; however the determinants of their antigenicity are not known. Here, we show that although mammalian 14-3-3 proteins are mostly conserved, subtle differences between their isoforms may give rise to their antigenicity. We observed syntenic relations among all the isoforms of 14-3-3 for mammals, but not with that of birds or amphibians. However, the parasitic 14-3-3 isoforms, which have known antigenic properties, show unique sequence, structure and evolution compared to the human 14-3-3. Moreover we report, for the first time the existence of a bacterial 14-3-3 protein. Contrary to the parasitic isoforms, both bacterial and yeast 14-3-3 exhibited significant homology with mammalian 14-3-3 in protein sequence as well as structure. Furthermore, a human 14-3-3 inhibitor caused significant killing of Candida albicans, which could be due to the inhibition of the structurally similar yeast homologue of 14-3-3, BMH, which is essential for its life cycle. Overall, our bioinformatic analysis combined with the demonstration of a novel antifungal role of a peptide inhibitor of human 14-3-3 indicates that the sequences and structural similarities between the mammalian, bacterial and fungal proteins are likely determinants of the antigenic nature of these proteins. Further, we propose that molecular mimicry triggered by microbial infections with either yeast or bacteria may contribute to the antigenic role of human 14-3-3.
41
VMD: Visual molecular dynamics
William Humphrey, Andrew Dalke, Klaus Schulten · Journal of Molecular Graphics · 1996 · 66.6K citations
WebLogo: A Sequence Logo Generator: Figure 1
Gavin E. Crooks, Gary C. Hon, John‐Marc Chandonia et al. · Genome Research · 2004 · 13K citations · Full text
Phylogeny.fr: robust phylogenetic analysis for the non-specialist
Alexis Dereeper, Valentin Guignon, Guillaume Blanc et al. · Nucleic Acids Research · 2008 · 4.8K citations · Full text
Template-based protein structure modeling using the RaptorX web server
Morten Källberg, Haipeng Wang, Sheng Wang et al. · Nature Protocols · 2012 · 1.7K citations · Full text