Concepedia

Taxon Profiling

Taxon Profiling is a metagenomic analysis method that characterizes the taxonomic composition of microbial communities by assigning sequencing reads to specific taxonomic units based on sequence similarity or marker gene identification.

145

Publications

16.1K

Citations

929

Authors

412

Institutions

Publications per year

2017–2026

76

Parents

Publications

145

STAMP: statistical analysis of taxonomic and functional profiles

Donovan H. Parks, Gene W. Tyson, Philip Hugenholtz et al. · Bioinformatics · 2014 · 4.3K citations · Full text

, , +12

Comparison of the Levels of Bacterial Diversity in Freshwater, Intertidal Wetland, and Marine Sediments by Using Millions of Illumina Tags

Yu Wang, Hua-Fang Sheng, Yan He et al. · Applied and Environmental Microbiology · 2012 · 905 citations · Full text

, , +17

DNA metabarcoding multiplexing and validation of data accuracy for diet assessment: application to omnivorous diet

Marta De Barba, C. Miquel, Frédéric Boyer et al. · Molecular Ecology Resources · 2013 · 575 citations

, , +13

VALENCIA: a nearest centroid classification method for vaginal microbial communities based on composition

Michael France, Bing Ma, Pawel Gajer et al. · Microbiome · 2020 · 445 citations · Full text

, , +16

bioBakery: a meta’omic analysis environment

Lauren J. McIver, Galeb Abu-Ali, Eric A. Franzosa et al. · Bioinformatics · 2017 · 405 citations · Full text

, , +12

1–5 of 145

Authors

929

  1. MP
    Mihai Pop

    University of Maryland, College Park, United States

    4 publications · 437 citations

    4

    h-index

  2. RB
    Richard B. Hayes

    National Cancer Institute, United States

    3 publications · 329 citations

    3

    h-index

  3. FH
    Falk Hildebrand

    Quadram Institute, United Kingdom

    3 publications · 171 citations

    3

    h-index

  4. TW
    Tandy Warnow

    The University of Texas at Austin, United States

    3 publications · 173 citations

    3

    h-index

  5. RK
    Rob Knight

    University of California San Diego, United States

    3 publications · 504 citations

    3

    h-index

1–5 of 929

Institutions

412

  1. University of Maryland, College Park

    College Park, United States

    5 h-index

    14 publications

    1.4K citations

  2. Swedish University of Agricultural Sciences

    Uppsala, Sweden

    5 h-index

    12 publications

    1.7K citations

  3. Chinese Academy of Sciences

    Beijing, China

    5 h-index

    26 publications

    750 citations

  4. Centre National de la Recherche Scientifique

    Paris, France

    5 h-index

    17 publications

    5K citations

  5. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    4 h-index

    14 publications

    968 citations

  6. Ghent University

    Ghent, Belgium

    4 h-index

    15 publications

    3.8K citations

  7. Bielefeld University

    Bielefeld, Germany

    4 h-index

    17 publications

    3K citations

  8. University of Colorado Boulder

    Boulder, United States

    4 h-index

    14 publications

    1.1K citations

1–8 of 412

Venues

  1. Bioinformatics

    13 publications · 5.3K citations

    12

    h-index

  2. Scientific Reports

    9 publications · 967 citations

    9

    h-index

  3. PLoS ONE

    8 publications · 620 citations

    8

    h-index

  4. BMC Genomics

    6 publications · 226 citations

    6

    h-index

  5. Microbiome

    6 publications · 917 citations

    6

    h-index

1–5