Concepedia

Sequence Logo Analysis

Sequence Logo Analysis is a computational method in bioinformatics that visually represents the conserved patterns and variability of nucleotide or amino acid residues at each position in a set of aligned biological sequences, using information theory to quantify residue frequencies and their informational content.

55

Publications

21.6K

Citations

190

Authors

93

Institutions

Publications per year

2017–2026

16

Parents

Publications

55

WebLogo: A Sequence Logo Generator: Figure 1

Gavin E. Crooks, Gary C. Hon, John‐Marc Chandonia et al. · Genome Research · 2004 · 13K citations · Full text

, , +15

Sequence logos: a new way to display consensus sequences

Thomas D. Schneider, Robert M. Stephens · Nucleic Acids Research · 1990 · 3.5K citations · Full text

, , +17

ggseqlogo: a versatile R package for drawing sequence logos

Omar Wagih · Bioinformatics · 2017 · 1.1K citations

, , +12

Logomaker: beautiful sequence logos in Python

Ammar Tareen, Justin B. Kinney · Bioinformatics · 2019 · 546 citations · Full text

, , +10

Seq2Logo: a method for construction and visualization of amino acid binding motifs and sequence profiles including sequence weighting, pseudo counts and two-sided representation of amino acid enrichment and depletion

Martin Christen Frølund Thomsen, Morten Nielsen · Nucleic Acids Research · 2012 · 464 citations · Full text

, , +16

1–5 of 55

Authors

190

  1. TD
    Thomas D. Schneider

    National Cancer Institute, United States

    6 publications · 3.8K citations

    6

    h-index

  2. MN
    Morten Nielsen

    Technical University of Denmark, Denmark

    3 publications · 525 citations

    3

    h-index

  3. JB
    Justin B. Kinney

    Cold Spring Harbor Laboratory, United States

    2 publications · 606 citations

    2

    h-index

  4. OL
    Ole Lund

    Technical University of Denmark, Denmark

    2 publications · 61 citations

    2

    h-index

  5. AT
    Ammar Tareen

    Cold Spring Harbor Laboratory, United States

    2 publications · 606 citations

    2

    h-index

1–5 of 190

Institutions

93

  1. Frederick National Laboratory for Cancer Research

    Frederick, United States

    6 h-index

    9 publications

    7.3K citations

  2. National Cancer Institute

    Bethesda, United States

    6 h-index

    9 publications

    7.4K citations

  3. Technical University of Denmark

    Kongens Lyngby, Denmark

    6 h-index

    13 publications

    1.8K citations

  4. National Institutes of Health

    Bethesda, United States

    3 h-index

    10 publications

    302 citations

  5. University of Copenhagen

    Copenhagen, Denmark

    3 h-index

    11 publications

    247 citations

  6. Cold Spring Harbor Laboratory

    Cold Spring Harbor, United States

    2 h-index

    4 publications

    1.2K citations

  7. National Center for Biotechnology Information

    Bethesda, United States

    2 h-index

    6 publications

    230 citations

  8. European Bioinformatics Institute

    Cambridge, United Kingdom

    2 h-index

    3 publications

    1.1K citations

1–8 of 93

Venues

  1. Nucleic Acids Research

    14 publications · 5.2K citations

    14

    h-index

  2. BMC Bioinformatics

    7 publications · 263 citations

    7

    h-index

  3. Bioinformatics

    7 publications · 1.7K citations

    7

    h-index

  4. Briefings in Bioinformatics

    3 publications · 160 citations

    3

    h-index

  5. PLoS ONE

    2 publications · 31 citations

    2

    h-index

1–5