Concepedia

Assembly Validation

Assembly Validation is the systematic assessment of the accuracy, completeness, and structural correctness of a reconstructed genome sequence relative to the original biological genome, distinguishing it from other assembly-related processes by its focus on evaluating fidelity and quality metrics.

95

Publications

13.7K

Citations

703

Authors

275

Institutions

Publications per year

2017–2026

46

Variants

Genome Assembly Validation

Parents

Children

Publications

95

Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies

Arang Rhie, Brian P. Walenz, Sergey Koren et al. · Genome biology · 2020 · 3.5K citations · Full text

, , +17

Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data

Yoshihiro Kawahara, M. de la Bastide, John P. Hamilton et al. · Rice · 2013 · 2.5K citations · Full text

, , +17

Optical maps refine the bread wheat <i>Triticum aestivum</i> cv. Chinese Spring genome assembly

Tingting Zhu, Le Wang, Hélène Rimbert et al. · The Plant Journal · 2021 · 587 citations · Full text

, , +14

The Release 6 reference sequence of the <i>Drosophila melanogaster</i> genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan et al. · Genome Research · 2015 · 576 citations · Full text

, , +17

Using average nucleotide identity to improve taxonomic assignments in prokaryotic genomes at the NCBI

Stacy Ciufo, Sivakumar Kannan, Shobha Sharma et al. · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2018 · 522 citations · Full text

, , +17

1–5 of 95

Authors

703

  1. AM
    Adam M. Phillippy

    National Human Genome Research Institute, United States

    11 publications · 4.3K citations

    11

    h-index

  2. SK
    Sergey Koren

    National Human Genome Research Institute, United States

    10 publications · 4.2K citations

    10

    h-index

  3. AR
    Arang Rhie

    National Human Genome Research Institute, United States

    7 publications · 3.9K citations

    7

    h-index

  4. MP
    Mihai Pop

    University of Maryland, College Park, United States

    5 publications · 743 citations

    5

    h-index

  5. GF
    Giulio Formenti

    Rockefeller University, United States

    5 publications · 278 citations

    5

    h-index

1–5 of 703

Institutions

275

  1. National Human Genome Research Institute

    Bethesda, United States

    9 h-index

    32 publications

    15.7K citations

  2. Howard Hughes Medical Institute

    Chevy Chase, United States

    7 h-index

    16 publications

    4.3K citations

  3. University of California, Santa Cruz

    Santa Cruz, United States

    6 h-index

    14 publications

    758 citations

  4. National Institutes of Health

    Bethesda, United States

    6 h-index

    27 publications

    20.1K citations

  5. University of Maryland, College Park

    College Park, United States

    5 h-index

    12 publications

    1.8K citations

  6. Wellcome Sanger Institute

    Cambridge, United Kingdom

    5 h-index

    15 publications

    3.2K citations

  7. Rockefeller University

    New York, United States

    5 h-index

    10 publications

    547 citations

  8. University of Washington

    Seattle, United States

    5 h-index

    21 publications

    1.1K citations

1–8 of 275

Venues

  1. Bioinformatics

    10 publications · 670 citations

    9

    h-index

  2. Genome biology

    8 publications · 5.3K citations

    8

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 6 publications · 216 citations

    6

    h-index

  4. Nucleic Acids Research

    6 publications · 252 citations

    6

    h-index

  5. BMC Bioinformatics

    4 publications · 162 citations

    4

    h-index

1–5