Nature Cell Biology · 2025 · 29 citations · 61 references
Cell LineageDevelopmental BiologyMedicineGeneticsMorphogenesisTranscriptomics TechnologyHuman Embryonic DevelopmentEmbryonic DevelopmentTranscriptomicsSpatial Transcriptomic CharacterizationGene ExpressionSpatial OmicsFunctional GenomicsEmbryology
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Comprehensive Integration of Single-Cell Data
Tim Stuart, Andrew Butler, Paul Hoffman et al. · Cell · 2019 · 16K citations · Full text
clusterProfiler 4.0: A universal enrichment tool for interpreting omics data
Tianzhi Wu, Erqiang Hu, Shuangbin Xu et al. · The Innovation · 2021 · 12.1K citations · Full text
SCANPY: large-scale single-cell gene expression data analysis
F. Alexander Wolf, Philipp Angerer, Fabian J. Theis · Genome biology · 2018 · 8.6K citations · Full text
Inference and analysis of cell-cell communication using CellChat
Suoqin Jin, Christian F. Guerrero‐Juarez, Lihua Zhang et al. · Nature Communications · 2021 · 7.5K citations · Full text