Spatial Transcriptomics

Spatial Transcriptomics is a high-throughput molecular profiling technique that belongs to the category of transcriptomic technologies and specifically enables the genome-wide measurement of gene expression levels within intact tissue sections while preserving the precise spatial coordinates of mRNA molecules.

1.2K

Publications

129.2K

Citations

7.7K

Authors

1.5K

Institutions

Publications per year

2017–2026

1.1K

Parents

Single-cell BioinformaticsSingle-cell Systems BiologyTranscriptomics

Children

Barcode-based Spatial ProfilingCell-state LocalizationDevelopmental Spatial PatterningDomain AnnotationGene Expression ImputationHigh-plex Rna ImagingHistological AlignmentImage Registration For TranscriptomicsLigand-receptor Interaction MappingMultimodal Spatial Integration

Publications

1.2K

Spatial reconstruction of single-cell gene expression data

Rahul Satija, Jeffrey A. Farrell, David Gennert et al. · Nature Biotechnology · 2015 · 7.7K citations · Full text

Life Sciences, Bioinformatics, Cell Biology +14

Visualization and analysis of gene expression in tissue sections by spatial transcriptomics

Patrik L. Ståhl, Fredrik Salmén, Sanja Vicković et al. · Science · 2016 · 3.9K citations

Life Sciences, Cell Biology, Molecular Biology +17

Spatially resolved, highly multiplexed RNA profiling in single cells

Kok Hao Chen, Alistair N. Boettiger, Jeffrey R. Moffitt et al. · Science · 2015 · 3.1K citations · Full text

Life Sciences, Cell Biology, Molecular Biology +17

Slide-seq: A scalable technology for measuring genome-wide expression at high spatial resolution

Samuel G. Rodriques, Robert R. Stickels, Aleksandrina Goeva et al. · Science · 2019 · 2.6K citations

Life Sciences, Molecular Biology, Neuroscience +17

Spatio-temporal transcriptome of the human brain

Hyo Jung Kang, Yuka Imamura Kawasawa, Feng Cheng et al. · Nature · 2011 · 2.2K citations

Life Sciences, Neurobiology, Neuroscience +14

1–5 of 1.2K

Authors

7.7K

JL
Joakim Lundeberg
KTH Royal Institute of Technology, Sweden
49 publications · 12.3K citations
35
h-index
LL
Ludvig Larsson
KTH Royal Institute of Technology, Sweden
22 publications · 3.1K citations
21
h-index
FC
Fei Chen
Broad Institute, United States
26 publications · 8.1K citations
21
h-index
EZ
Evan Z. Macosko
Broad Institute, United States
23 publications · 8.6K citations
20
h-index
AC
Ao Chen
BGI Group (China), China
21 publications · 4.2K citations
20
h-index

1–5 of 7.7K

Institutions

1.5K

1–8 of 1.5K

Venues

Nature Communications
108 publications · 14.1K citations
63
h-index
bioRxiv (Cold Spring Harbor Laboratory)
Repository · 180 publications · 5.9K citations
40
h-index
Nature Methods
38 publications · 8.9K citations
33
h-index
Nature Biotechnology
33 publications · 20.6K citations
33
h-index
Nucleic Acids Research
36 publications · 3.6K citations
29
h-index

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