Concepedia

Barcode-based Spatial Profiling

Barcode-Based Spatial Profiling is a spatial transcriptomics method that assigns location-specific molecular barcodes to RNA transcripts within intact tissue sections, enabling high-throughput gene expression mapping by leveraging barcode sequences to retain spatial information during sequencing.

12

Publications

520

Citations

78

Authors

22

Institutions

Publications per year

2017–2026

12

Parents

Publications

12

Barcoded solid-phase RNA capture for Spatial Transcriptomics profiling in mammalian tissue sections

Fredrik Salmén, Patrik L. Ståhl, Annelie Mollbrink et al. · Nature Protocols · 2018 · 214 citations

, , +12

Continuous Polony Gels for Tissue Mapping with High Resolution and RNA Capture Efficiency

Xiaonan Fu, Li Sun, Jane Chen et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2021 · 73 citations · Full text

, , +17

Preparation of plant tissue to enable Spatial Transcriptomics profiling using barcoded microarrays

Stefania Giacomello, Joakim Lundeberg · Nature Protocols · 2018 · 59 citations

, , +14

Spatial transcriptomics for profiling the tropism of viral vectors in tissues

Min Jee Jang, Gerard Michael Coughlin, Cameron Jackson et al. · Nature Biotechnology · 2023 · 52 citations · Full text

, , +15

Nova-ST: Nano-patterned ultra-dense platform for spatial transcriptomics

Suresh Poovathingal, Kristofer Davie, Lars E. Borm et al. · Cell Reports Methods · 2024 · 28 citations · Full text

, , +11

1–5 of 12

Authors

78

  1. YX
    Yang Xiao

    Yale University, United States

    3 publications · 36 citations

    3

    h-index

  2. GS
    Graham Su

    Yale University, United States

    3 publications · 36 citations

    3

    h-index

  3. JL
    Joakim Lundeberg

    KTH Royal Institute of Technology, Sweden

    3 publications · 298 citations

    3

    h-index

  4. CC
    Cindy C. Guo

    Yale University, United States

    3 publications · 36 citations

    3

    h-index

  5. RF
    Rong Fan

    Yale University, United States

    3 publications · 36 citations

    3

    h-index

1–5 of 78

Institutions

22

  1. Science for Life Laboratory

    Stockholm, Sweden

    3 h-index

    13 publications

    1.5K citations

  2. Yale University

    New Haven, United States

    3 h-index

    41 publications

    471 citations

  3. KTH Royal Institute of Technology

    Stockholm, Sweden

    3 h-index

    13 publications

    1.5K citations

  4. VIB-KU Leuven Center for Brain & Disease Research

    Leuven, Belgium

    2 h-index

    13 publications

    262 citations

  5. Yale Cancer Center

    New Haven, United States

    2 h-index

    14 publications

    147 citations

  6. Massachusetts Institute of Technology

    Cambridge, United States

    2 h-index

    8 publications

    298 citations

  7. KU Leuven

    Leuven, Belgium

    2 h-index

    7 publications

    145 citations

  8. Research Network (United States)

    Kennesaw, United States

    2 h-index

    3 publications

    67 citations

1–8 of 22

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 6 publications · 142 citations

    6

    h-index

  2. Nature Protocols

    2 publications · 273 citations

    2

    h-index

  3. Nature Biotechnology

    1 publications · 52 citations

    1

    h-index

  4. Cell Reports Methods

    1 publications · 28 citations

    1

    h-index

  5. SSRN Electronic Journal

    Repository · 1 publications · 15 citations

    1

    h-index

1–5