mBio · 2023 · 18 citations · 85 references
Life SciencesMedicinal ChemistryMolecular BiologyDrug DiscoveryMolecular VirologyStructural BiologyAntiretroviral TherapyLigand BindingMacromolecular AssemblyProtein DimerizationProtein-ligand BindingProtein-ligand InteractionsAllosteric FoldingAllosteric InteractionsBinding Pocket GeometryIntegrase ProteinsStructural Basis Of Viral MaturationViral Maturation Cleavage SitesViral Maturation InhibitorsViral Protein Oligomerization
Despite the remarkable success of combination antiretroviral therapy, HIV-1 remains among the major causes of human suffering and loss of life in poor and developing nations. To prevail in this drawn-out battle with the pandemic, it is essential to continue developing advanced antiviral agents to fight drug resistant HIV-1 variants. Allosteric integrase inhibitors (ALLINIs) are an emerging class of HIV-1 antagonists that are orthogonal to the current antiretroviral drugs. These small molecules act as highly specific molecular glue, which triggers the aggregation of HIV-1 integrase. In this work, we present high-resolution crystal structures that reveal the crucial interactions made by two potent ALLINIs, namely, BI-D and Pirmitegravir, with HIV-1 integrase. Our results explain the mechanism of drug action and will inform the development of this promising class of small molecules for future use in antiretroviral regimens.
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VMD: Visual molecular dynamics
William Humphrey, Andrew Dalke, Klaus Schulten · Journal of Molecular Graphics · 1996 · 66.6K citations
<i>Phaser</i>crystallographic software
Airlie J. McCoy, Ralf W. Grosse‐Kunstleve, Paul D. Adams et al. · Journal of Applied Crystallography · 2007 · 20.9K citations · Full text