Pavel V. Afonine - Concepedia

Author

Pavel V. Afonine

Lawrence Berkeley National Laboratory ORCID

Also Known As

Afonine, P., Afonine, Pavel, Afonine, Pavel V, P. Afonine, P. V. Afonine, P.V. Afonine, Pavel Afonine, Pavel V Afonine, Pavel V. Afonine, Pavel V. Afonine

186

Publications

60.4K

Citations

H-Index

114

Concepts

All Affiliations

Lawrence Berkeley National Laboratory University of California, Berkeley Los Alamos National Laboratory University of Cambridge New Mexico Consortium

About

Pavel V. Afonine is an author at Lawrence Berkeley National Laboratory specializing in molecular biology, biophysics, and engineering.

Top Concepts

#	Concept	H-Index	Publications	Citations
1	Engineering	25	31	8.9K
2	Natural Sciences	25	32	39K
3	Medicine	20	24	33.8K
4	Health Sciences	2	2	448
5	Social Sciences	1	1	11

Pavel V. Afonine

Publications

52.7K

Citations

H-Index

Page 1

	Year	Citations
<i>PHENIX</i>: a comprehensive Python-based system for macromolecular structure solution Paul D. Adams, Pavel V. Afonine, G. Bunkóczi, Acta Crystallographica Section D Biological Crystallography X-ray CrystallographyStructural BioinformaticsBiomolecular Structure PredictionNatural SciencesMedicine	2010	24.1K
Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in <i>Phenix</i> Dorothée Liebschner, Pavel V. Afonine, Matthew L. Baker, Acta Crystallographica Section D Structural Biology X-ray CrystallographyX-ray SpectroscopyComprehensive Software PackageBiomolecular Structure PredictionBiomolecular Tool	2019	7K
Towards automated crystallographic structure refinement with <i>phenix.refine</i> Pavel V. Afonine, Ralf W. Grosse‐Kunstleve, Nathaniel Echols, Acta Crystallographica Section D Biological Crystallography Materials ScienceX-ray CrystallographyCrystal StructureEngineeringCrystalline Defects	2012	5.6K
Real-space refinement in <i>PHENIX</i> for cryo-EM and crystallography Pavel V. Afonine, Billy K. Poon, Randy J. Read, Acta Crystallographica Section D Structural Biology	2018	3.5K
Iterative model building, structure refinement and density modification with the<i>PHENIX AutoBuild</i>wizard Thomas C. Terwilliger, Ralf W. Grosse‐Kunstleve, Pavel V. Afonine, Acta Crystallographica Section D Biological Crystallography	2007	1.5K
The Phenix software for automated determination of macromolecular structures Paul D. Adams, Pavel V. Afonine, G. Bunkóczi, Methods Biomolecular Structure PredictionStructure DeterminationMolecular BiologyPhenix SoftwareStructural Biology	2011	961
Decision-making in structure solution using Bayesian estimates of map quality: the<i>PHENIX AutoSol</i>wizard Thomas C. Terwilliger, Paul D. Adams, Randy J. Read, Acta Crystallographica Section D Biological Crystallography Electron DensityEngineeringUncertainty QuantificationStructure SolutionQuantitative Analysis	2009	863
New tools for the analysis and validation of cryo-EM maps and atomic models Pavel V. Afonine, Bruno P. Klaholz, Nigel W. Moriarty, Acta Crystallographica Section D Structural Biology	2018	829
Polder maps: improving OMIT maps by excluding bulk solvent Dorothée Liebschner, Pavel V. Afonine, Nigel W. Moriarty, Acta Crystallographica Section D Structural Biology	2017	660
Automated Structure Solution with the PHENIX Suite Peter H. Zwart, Pavel V. Afonine, Ralf W. Grosse‐Kunstleve, Methods in molecular biology	2008	557

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