Extracellular hydrolytic potential drives microbiome shifts during anaerobic co-digestion of sewage sludge and food waste

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

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MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct <i>de Bruijn</i> graph

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The carbohydrate-active enzymes database (CAZy) in 2013

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GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database

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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities

Dongwan Kang, Jeff Froula, Rob Egan et al. · PeerJ · 2015 · 2.1K citations · Full text

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