Concepedia

Characterization of Bacillus cereus sensu lato isolates from milk for consumption; phylogenetic identity, potential for spoilage and disease

Davide Porcellato, Siv Skeie, Hilde Mellegård, Marte Monshaugen, Stine Göransson Aanrud, Bjørn-Arne Lindstedt, Marina Aspholm

Food Microbiology · 2020 · 24 citations · 43 references

DOI

Concepts

References

43

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

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SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich, Sergey Nurk, Dmitry Antipov et al. · Journal of Computational Biology · 2012 · 27.2K citations

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BLAST+: architecture and applications

Christiam Camacho, George Coulouris, Vahram Avagyan et al. · BMC Bioinformatics · 2009 · 23.2K citations · Full text

, , +13

Prokka: rapid prokaryotic genome annotation

Torsten Seemann · Bioinformatics · 2014 · 19.6K citations

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FLASH: fast length adjustment of short reads to improve genome assemblies

Tanja Magoč, Steven L. Salzberg · Bioinformatics · 2011 · 15.7K citations · Full text

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