Red Wine Consumption Associated With Increased Gut Microbiota α-Diversity in 3 Independent Cohorts

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan, Paul J. McMurdie, Michael Rosen et al. · Nature Methods · 2016 · 36.3K citations

Life Sciences, Bioinformatics, Genetics +9

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

Paul J. McMurdie, Susan Holmes · PLoS ONE · 2013 · 22.5K citations · Full text

Life Sciences, Biology, Microbiology +15

Human Genetics Shape the Gut Microbiome

Julia K. Goodrich, Jillian L. Waters, Angela C. Poole et al. · Cell · 2014 · 3.3K citations · Full text

Life Sciences, Genetics, Microbiology +14

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

Paul J. McMurdie, Susan Holmes · PLoS Computational Biology · 2014 · 3.1K citations · Full text

Life Sciences, Biostatistics, Microbiology +14

The neuroactive potential of the human gut microbiota in quality of life and depression

Mireia Valles‐Colomer, Gwen Falony, Youssef Darzi et al. · Nature Microbiology · 2019 · 2K citations · Full text

Life Sciences, Neuroscience, Psychiatry +14