Emerging infectious diseases · 2018 · 48 citations · 23 references
Life SciencesInfectious DiseasesMicrobiologyBacteriologyHost-pathogen InteractionsMedical MicrobiologyBacterial EpidemiologyBacterial InfectionsCarbapenem ResistanceMicrobial PhylogenomicsMicrobial PhylogenyMolecular PhylogenyCarbapenem Resistance MechanismsCarbapenem Resistance PlasmidsMolecular Typing Of BacteriaPersistencePhylogenomic ClassificationPhylogenomics Of PathogensWhole-genome Average Nucleotide IdentityWhole-genome Sequence Analysis
in the other. These isolates formed a new subgroup in the E. hormaechei metacluster, according to their hsp60 sequences and phylogenomic analysis. The average nucleotide identities, specific biochemical properties, and pangenomic and functional investigations of isolates suggested isolates of a novel species that had acquired genes associated with adhesion and mobility. The emergence of this novel Enterobacter phylogenetic lineage within hospitals should be closely monitored because of its ability to persist and spread.
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Fast and accurate short read alignment with Burrows–Wheeler transform
Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text
Bruce J. Walker, Thomas Abeel, Terrance Shea et al. · PLoS ONE · 2014 · 10.2K citations · Full text