Concepedia

Phylogenomics Of Pathogens

Phylogenomics of Pathogens is a computational and evolutionary biology approach that infers the evolutionary relationships among pathogens by integrating whole-genome sequence data with phylogenetic analysis to resolve their genomic relatedness, origin, and transmission dynamics.

567

Publications

35.6K

Citations

4.3K

Authors

1.4K

Institutions

Publications per year

2017–2026

295

Parents

Publications

567

Genomic analysis of diversity, population structure, virulence, and antimicrobial resistance in <i>Klebsiella pneumoniae</i> , an urgent threat to public health

Kathryn E. Holt, Heiman Wertheim, Ruth N. Zadoks et al. · Proceedings of the National Academy of Sciences · 2015 · 1.3K citations · Full text

, , +17

GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens

Zhemin Zhou, Nabil-Fareed Alikhan, Martin J. Sergeant et al. · Genome Research · 2018 · 1.1K citations · Full text

, , +16

The EnteroBase user's guide, with case studies on <i>Salmonella</i> transmissions, <i>Yersinia pestis</i> phylogeny, and <i>Escherichia</i> core genomic diversity

Zhemin Zhou, Nabil-Fareed Alikhan, Khaled Mohamed et al. · Genome Research · 2019 · 1K citations · Full text

, , +17

Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity

Giovanna Morelli, Yajun Song, Camila J. Mazzoni et al. · Nature Genetics · 2010 · 572 citations · Full text

, , +16

Phylogenetic Position of Phytopathogens within the Enterobacteriaceae

Lysiane Hauben, Edward R. B. Moore, L. Vauterin et al. · Systematic and Applied Microbiology · 1998 · 495 citations

, , +12

1–5 of 567

Authors

4.3K

  1. NR
    Nicholas R. Thomson

    Wellcome Sanger Institute, United Kingdom

    20 publications · 3.7K citations

    19

    h-index

  2. JP
    Julian Parkhill

    Wellcome Sanger Institute, United Kingdom

    18 publications · 2.2K citations

    18

    h-index

  3. GD
    Gordon Dougan

    Wellcome Sanger Institute, United Kingdom

    13 publications · 1.7K citations

    13

    h-index

  4. FW
    François‐Xavier Weill

    Institut Pasteur, France

    14 publications · 1.6K citations

    13

    h-index

  5. PK
    Paul Keim

    Northern Arizona University, United States

    14 publications · 1.4K citations

    12

    h-index

1–5 of 4.3K

Institutions

1.4K

  1. Wellcome Sanger Institute

    Cambridge, United Kingdom

    30 h-index

    159 publications

    23.8K citations

  2. Centers for Disease Control and Prevention

    Atlanta, United States

    26 h-index

    151 publications

    11.4K citations

  3. Institut Pasteur

    Paris, France

    23 h-index

    90 publications

    13.6K citations

  4. London School of Hygiene & Tropical Medicine

    London, United Kingdom

    23 h-index

    77 publications

    8.8K citations

  5. University of Cambridge

    Cambridge, United Kingdom

    22 h-index

    45 publications

    4.3K citations

  6. Centre National de la Recherche Scientifique

    Paris, France

    21 h-index

    57 publications

    5.9K citations

  7. University of Oxford

    Oxford, United Kingdom

    19 h-index

    80 publications

    9.2K citations

  8. The University of Melbourne

    Melbourne, Australia

    16 h-index

    105 publications

    15K citations

1–8 of 1.4K

Venues

  1. PLoS ONE

    28 publications · 2.2K citations

    23

    h-index

  2. Nature Communications

    24 publications · 2K citations

    22

    h-index

  3. BMC Genomics

    28 publications · 1.8K citations

    21

    h-index

  4. Frontiers in Microbiology

    25 publications · 1.1K citations

    19

    h-index

  5. Microbial Genomics

    MGen · 27 publications · 1K citations

    17

    h-index

1–5