Journal of the American Chemical Society · 2017 · 48 citations · 21 references
PharmacyBiochemistryOncologyAntibody EngineeringMolecular OncologyStructural BiologyAntibody CharacterizationAntibody ConjugatesAntibody ScreeningAntibody StructureAntibody-antigen RecognitionDiagnostic Antibody DesignAffinity ImprovementAntigen-antibody Complex FormationPeptide-based ProbesProstate Cancer DiagnosisStructure-based Protein DesignTumor-targeting Peptides
A structure-based design of a new generation of tumor-associated glycopeptides with improved affinity against two anti-MUC1 antibodies is described. These unique antigens feature a fluorinated proline residue, such as a (4S)-4-fluoro-l-proline or 4,4-difluoro-l-proline, at the most immunogenic domain. Binding assays using biolayer interferometry reveal 3-fold to 10-fold affinity improvement with respect to the natural (glyco)peptides. According to X-ray crystallography and MD simulations, the fluorinated residues stabilize the antigen-antibody complex by enhancing key CH/π interactions. Interestingly, a notable improvement in detection of cancer-associated anti-MUC1 antibodies from serum of patients with prostate cancer is achieved with the non-natural antigens, which proves that these derivatives can be considered better diagnostic tools than the natural antigen for prostate cancer.
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Yan Zhao, Donald G. Truhlar · Theoretical Chemistry Accounts · 2007 · 30K citations · Full text
Natural Sciences, Chemistry, Physics +17
Carbohydrate–Aromatic Interactions
Juan Luis Asensio, Ana Ardá, F. Javier Cañada et al. · Accounts of Chemical Research · 2012 · 480 citations · Full text
Carbohydrate–Aromatic Interactions in Proteins
Kieran L. Hudson, Gail J. Bartlett, Roger C. Diehl et al. · Journal of the American Chemical Society · 2015 · 412 citations · Full text