2016 · 15 citations · 38 references
EngineeringGeneticsMolecular BiologyCrispr ResearchExperimental Crispr TargetingGenomicsBioinformatics DatabaseGrid DatabaseGenome EngineeringCrisprOff-target EffectOmicsFunctional GenomicsBioinformaticsComputational BiologyGenetic EngineeringGene EditingSystems BiologyMedicineGene Deletion DataGenome Editing
ABSTRACT CRISPR-Cas9 genome-editing is a revolutionary technology that is transforming biological research. The explosive growth and advances in CRISPR research over the last few years, coupled with the potential for clinical applications and therapeutics, is heralding a new era for genome engineering. To further support this technology platform and to provide a universal CRISPR annotation system, we introduce the grID database ( http://crispr.technology ), an extensive compilation of gRNA properties including sequence and variations, thermodynamic parameters, off-target analyses, and alternative PAM sites, among others. To aid in the design of optimal gRNAs, the website is integrated with other prominent databases, providing a wealth of additional resources to guide users from in silico analysis through experimental CRISPR targeting. Here, we make available all the tools, protocols, and plasmids that are needed for successful CRISPR-based genome targeting.
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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
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Multiplex Genome Engineering Using CRISPR/Cas Systems
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Enzymatic assembly of DNA molecules up to several hundred kilobases
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RNA-Guided Human Genome Engineering via Cas9
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