Concepedia

Upregulation of SNHG6 regulates ZEB1 expression by competitively binding miR-101-3p and interacting with UPF1 in hepatocellular carcinoma

Lei Chang, Yufeng Yuan, Cuicui Li, Tao Guo, Haolong Qi, Yusha Xiao, Dong Xu, Zhisu Liu, Quanyan Liu

Cancer Letters · 2016 · 162 citations · 35 references

DOI

Concepts

References

35

TopHat: discovering splice junctions with RNA-Seq

Cole Trapnell, Lior Pachter, Steven L. Salzberg · Bioinformatics · 2009 · 12.1K citations · Full text

, , +16

Predicting effective microRNA target sites in mammalian mRNAs

Vikram Agarwal, George W. Bell, Jin‐Wu Nam et al. · eLife · 2015 · 7.7K citations · Full text

, , +16

starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data

Jun-Hao Li, Shun Liu, Hui Zhou et al. · Nucleic Acids Research · 2013 · 6K citations · Full text

, , +16

RSeQC: quality control of RNA-seq experiments

Liguo Wang, Shengqin Wang, Wei Li · Bioinformatics · 2012 · 3K citations · Full text

, , +15

The MAD-Related Protein Smad7 Associates with the TGFβ Receptor and Functions as an Antagonist of TGFβ Signaling

Hidetoshi Hayashi, Shirin Abdollah, Yubin Qiu et al. · Cell · 1997 · 1.3K citations · Full text

, , +7