Molecules · 2016 · 17 citations · 27 references
PharmacyMicrobiologyMolecular GeneticsDrug DiscoveryGenetic EngineeringMicrobial GeneticsBiosynthetic Gene ClustersMicrobial Natural Product BiosynthesisPolyketide BiosynthesisActinomycete Secondary MetabolismBiosynthetic Gene Cluster AnalysisBiosynthetic Gene Cluster EvolutionGenome MiningGenome Mining For Natural ProductsGenome-enabled Natural Product DiscoveryMicrobial Genome-encoded BiosynthesisMolecular Characterization
Genome mining is an effective tool used to discover novel natural products from actinomycetes. Genome sequence analysis of Streptomyces sp. FJS31-2 revealed the presence of one putative type II polyketide gene cluster (ABX), which may correspond to type II polyketide products including BE-24566B and its chloro-derivatives. The addition of natural humus acid successfully activated the biosynthsis of the abx gene cluster. BE-24566B and its chloro-derivatives, named zunyimycin A, were also detected. The targeted deletion of the polyketide skeleton synthesis genes such as abxp, abxk, and abxs was performed in the wild strain to identify the gene cluster for BE-24566B biosynthesis.
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De novo assembly of human genomes with massively parallel short read sequencing
Ruiqiang Li, Hongmei Zhu, Jue Ruan et al. · Genome Research · 2009 · 3K citations · Full text
Biosynthesis of the Enediyne Antitumor Antibiotic C-1027
Wen Liu, Steven D. Christenson, Scott Standage et al. · Science · 2002 · 282 citations