Jue Ruan

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

Life Sciences, Bioinformatics, Genetics +17

De novo assembly of human genomes with massively parallel short read sequencing

Ruiqiang Li, Hongmei Zhu, Jue Ruan et al. · Genome Research · 2009 · 3K citations · Full text

Life Sciences, Bioinformatics, Biology +16

Mapping short DNA sequencing reads and calling variants using mapping quality scores

Heng Li, Jue Ruan, Richard Durbin · Genome Research · 2008 · 2.7K citations · Full text

Life Sciences, Bioinformatics, Biology +17

Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome

Aaron M. Wenger, Paul Peluso, William J. Rowell et al. · Nature Biotechnology · 2019 · 1.9K citations · Full text

Life Sciences, Bioinformatics, Genetics +16

Genomic variation in 3,010 diverse accessions of Asian cultivated rice

Wensheng Wang, Ramil Mauleon, Zhiqiang Hu et al. · Nature · 2018 · 1.9K citations · Full text

Life Sciences, Genetics, Molecular Genetics +17