Concepedia

Transcriptome Assembly Validation

Transcriptome Assembly Validation is the systematic assessment of the accuracy, completeness, and biological fidelity of reconstructed transcript sequences derived from long-read RNA sequencing data by comparing them against orthogonal evidence such as genomic annotations, experimental data, or expected splicing patterns.

30

Publications

1.3K

Citations

257

Authors

111

Institutions

Publications per year

2017–2026

11

Parents

Publications

30

Development and validation of genic-SSR markers in sesame by RNA-seq

Haiyang Zhang, Libin Wei, Hongmei Miao et al. · BMC Genomics · 2012 · 138 citations · Full text

, , +14

De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics

Catherine Adamidi, Yongbo Wang, Dominic Gruen et al. · Genome Research · 2011 · 110 citations · Full text

, , +17

<i>De novo</i> assembly of maritime pine transcriptome: implications for forest breeding and biotechnology

Javier Canales, Rocí­o Bautista, Philippe Label et al. · Plant Biotechnology Journal · 2013 · 109 citations · Full text

, , +16

Composite transcriptome assembly of RNA-seq data in a sheep model for delayed bone healing

Marten Jäger, Claus‐Eric Ott, Johannes Grünhagen et al. · BMC Genomics · 2011 · 67 citations · Full text

, , +17

A SNP resource for Douglas-fir: de novo transcriptome assembly and SNP detection and validation

Glenn T. Howe, Jianbin Yu, Brian J. Knaus et al. · BMC Genomics · 2013 · 65 citations · Full text

, , +17

1–5 of 30

Authors

257

  1. BJ
    Brian J. Knaus

    Horticultural Crops Research Laboratory, United States

    2 publications · 102 citations

    2

    h-index

  2. RC
    Richard Cronn

    Pacific Northwest Research Station, United States

    2 publications · 102 citations

    2

    h-index

  3. SY
    Shigenori Yaguchi

    Yamaguchi University, Japan

    1 publications · 47 citations

    1

    h-index

  4. YZ
    Yinli Zhao

    Henan Agricultural University, China

    1 publications · 62 citations

    1

    h-index

  5. RB
    Rocí­o Bautista

    Universidad de Málaga, Spain

    1 publications · 109 citations

    1

    h-index

1–5 of 257

Institutions

111

  1. Université de Bordeaux

    Bordeaux, France

    2 h-index

    6 publications

    561 citations

  2. Chinese Academy of Fishery Sciences

    Beijing, China

    2 h-index

    8 publications

    398 citations

  3. Pacific Northwest Research Station

    Portland, United States

    2 h-index

    3 publications

    167 citations

  4. Chinese Academy of Sciences

    Beijing, China

    2 h-index

    12 publications

    342 citations

  5. CEA CESTA

    Le Barp, France

    2 h-index

    9 publications

    888 citations

  6. Japan Society for the Promotion of Science

    Tokyo, Japan

    1 h-index

    1 publications

    47 citations

  7. Lawrence Berkeley National Laboratory

    Berkeley, United States

    1 h-index

    1 publications

    37 citations

  8. Konkuk University

    Seoul, South Korea

    1 h-index

    3 publications

    66 citations

1–8 of 111

Venues

  1. BMC Genomics

    4 publications · 282 citations

    4

    h-index

  2. PLoS ONE

    3 publications · 81 citations

    3

    h-index

  3. Fish & Shellfish Immunology

    2 publications · 114 citations

    2

    h-index

  4. Plant Cell Reports

    2 publications · 46 citations

    2

    h-index

  5. Molecular Breeding

    2 publications · 81 citations

    2

    h-index

1–5