Concepedia

Trajectory Graph Inference

Trajectory Graph Inference is a computational method that, within the field of single-cell genomics, reconstructs the high-dimensional state transitions of cellular differentiation or development by modeling inferred trajectories as directed graphs that represent branching and merging dynamics among cell states.

23

Publications

17.6K

Citations

127

Authors

73

Institutions

Publications per year

2017–2026

18

Parents

Publications

23

SCANPY: large-scale single-cell gene expression data analysis

F. Alexander Wolf, Philipp Angerer, Fabian J. Theis · Genome biology · 2018 · 9.3K citations · Full text

, , +15

Reversed graph embedding resolves complex single-cell trajectories

Xiaojie Qiu, Qi Mao, Ying Tang et al. · Nature Methods · 2017 · 5.4K citations · Full text

, , +6

PAGA: graph abstraction reconciles clustering with trajectory inference through a topology preserving map of single cells

F. Alexander Wolf, Fiona Hamey, Mireya Plass et al. · Genome biology · 2019 · 1.8K citations · Full text

, , +17

Unsupervised Trajectory Analysis of Single-Cell RNA-Seq and Imaging Data Reveals Alternative Tuft Cell Origins in the Gut

Charles A. Herring, Amrita Banerjee, Eliot T. McKinley et al. · Cell Systems · 2017 · 212 citations · Full text

, , +17

Learning a Proposal Classifier for Multiple Object Tracking

Peng Dai, Renliang Weng, Wongun Choi et al. · 2021 · 125 citations

, , +15

1–5 of 23

Authors

127

  1. FJ
    Fabian J. Theis

    Helmholtz Zentrum München, Germany

    4 publications · 11.2K citations

    4

    h-index

  2. WS
    Wouter Saelens

    Ghent University, Belgium

    3 publications · 193 citations

    3

    h-index

  3. RC
    Robrecht Cannoodt

    VIB-UGent Center for Inflammation Research, Belgium

    3 publications · 193 citations

    3

    h-index

  4. FA
    F. Alexander Wolf

    Helmholtz Zentrum München, Germany

    3 publications · 11.2K citations

    3

    h-index

  5. YS
    Yvan Saeys

    Ghent University, Belgium

    3 publications · 193 citations

    3

    h-index

1–5 of 127

Institutions

73

  1. Technical University of Munich

    Munich, Germany

    4 h-index

    14 publications

    11.5K citations

  2. Helmholtz Zentrum München

    Munich, Germany

    4 h-index

    25 publications

    34.1K citations

  3. Ghent University

    Ghent, Belgium

    3 h-index

    11 publications

    704 citations

  4. Shanghai Jiao Tong University

    Shanghai, China

    3 h-index

    9 publications

    5.6K citations

  5. VIB-UGent Center for Inflammation Research

    Ghent, Belgium

    3 h-index

    11 publications

    704 citations

  6. University of Illinois Chicago

    Chicago, United States

    2 h-index

    2 publications

    5.4K citations

  7. Centre International de Recherche en Infectiologie

    Lyon, France

    2 h-index

    2 publications

    125 citations

  8. Université Claude Bernard Lyon 1

    Villeurbanne, France

    2 h-index

    2 publications

    125 citations

1–8 of 73

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 4 publications · 216 citations

    3

    h-index

  2. Genome biology

    2 publications · 11.1K citations

    2

    h-index

  3. 1

    h-index

  4. Frontiers in Aging Neuroscience

    1 publications · 23 citations

    1

    h-index

  5. Bioinformatics

    1 publications · 32 citations

    1

    h-index

1–5