Concepedia

Synthetic Microbiomes

Synthetic Microbiomes is a constructed microbial community engineered through intentional assembly of defined microbial taxa or strains to perform specific, predictable functions within a host or environment, distinguished from natural microbiomes by its design-driven composition and purposeful functional integration.

20

Publications

1K

Citations

89

Authors

44

Institutions

Publications per year

2017–2026

17

Parents

Publications

20

Design of synthetic human gut microbiome assembly and butyrate production

Ryan L. Clark, Bryce Connors, David Stevenson et al. · Nature Communications · 2021 · 200 citations · Full text

, , +17

Engineering natural microbiomes toward enhanced bioremediation by microbiome modeling

Zhepu Ruan, Kai Chen, Weimiao Cao et al. · Nature Communications · 2024 · 195 citations · Full text

, , +17

A Strongly Fluorescing Anaerobic Reporter and Protein-Tagging System for <i>Clostridium</i> Organisms Based on the Fluorescence-Activating and Absorption-Shifting Tag Protein (FAST)

Hannah Streett, Katie M. Kalis, Eleftherios T. Papoutsakis · Applied and Environmental Microbiology · 2019 · 70 citations · Full text

, , +17

Dynamic metabolic interactions and trophic roles of human gut microbes identified using a minimal microbiome exhibiting ecological properties

Sudarshan A. Shetty, Ioannis Kostopoulos, Sharon Y. Geerlings et al. · The ISME Journal · 2022 · 67 citations · Full text

, , +17

Structural identifiability of the generalized Lotka–Volterra model for microbiome studies

Christopher H. Remien, Mariah J. Eckwright, Benjamin J. Ridenhour · Royal Society Open Science · 2021 · 56 citations · Full text

, , +13

1–5 of 20

Authors

89

  1. OS
    Ophelia S. Venturelli

    University of Wisconsin–Madison, United States

    3 publications · 228 citations

    3

    h-index

  2. RL
    Ryan L. Clark

    University of Wisconsin–Madison, United States

    3 publications · 228 citations

    3

    h-index

  3. BC
    Bryce Connors

    University of Wisconsin–Madison, United States

    2 publications · 216 citations

    2

    h-index

  4. JT
    Jaron Thompson

    University of Wisconsin–Madison, United States

    2 publications · 28 citations

    2

    h-index

  5. BY
    Bingang Yang

    Nanjing Agricultural University, China

    1 publications · 195 citations

    1

    h-index

1–5 of 89

Institutions

44

  1. University of Wisconsin–Madison

    Madison, United States

    3 h-index

    16 publications

    1.5K citations

  2. Agency for Science, Technology and Research

    Singapore, Singapore

    1 h-index

    3 publications

    123 citations

  3. Ministry of Agriculture and Rural Affairs

    Beijing, China

    1 h-index

    11 publications

    2.1K citations

  4. National University of Singapore

    Singapore, Singapore

    1 h-index

    2 publications

    82 citations

  5. Northeastern University

    Boston, United States

    1 h-index

    1 publications

    22 citations

  6. University of Michigan

    Ann Arbor, United States

    1 h-index

    2 publications

    24 citations

  7. Duke University

    Durham, United States

    1 h-index

    6 publications

    294 citations

  8. Kansas State University

    Manhattan, United States

    1 h-index

    6 publications

    120 citations

1–8 of 44

Venues

  1. Nature Communications

    2 publications · 395 citations

    2

    h-index

  2. Cell Systems

    2 publications · 32 citations

    2

    h-index

  3. Applied and Environmental Microbiology

    AEM · 2 publications · 90 citations

    2

    h-index

  4. 1

    h-index

  5. BMC Bioinformatics

    1 publications · 41 citations

    1

    h-index

1–5