Spatial Transcriptomics Visualization is a specialized form of single-cell data visualization that integrates spatial coordinates with transcriptomic expression profiles to enable the mapping and interpretation of gene activity within the architectural context of intact tissue sections.
47
Publications
8.1K
Citations
330
Authors
107
Institutions
Publications per year
2017–2026
43
Publications
47
Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
Patrik L. Ståhl, Fredrik Salmén, Sanja Vicković et al. · Science · 2016 · 3.9K citations
Squidpy: a scalable framework for spatial omics analysis
Giovanni Palla, Hannah Spitzer, Michal Klein et al. · Nature Methods · 2022 · 1.1K citations · Full text
Giotto: a toolbox for integrative analysis and visualization of spatial expression data
Ruben Dries, Qian Zhu, Rui Dong et al. · Genome biology · 2021 · 950 citations · Full text
DestVI identifies continuums of cell types in spatial transcriptomics data
Romain Lopez, Baoguo Li, Hadas Keren‐Shaul et al. · Nature Biotechnology · 2022 · 249 citations · Full text
Polony gels enable amplifiable DNA stamping and spatial transcriptomics of chronic pain
Xiaonan Fu, Li Sun, Runze Dong et al. · Cell · 2022 · 157 citations · Full text
1–5 of 47
Authors
330
- JL
5
h-index
- PL
4
h-index
- LCLeonardo Collado‐Torres
Lieber Institute for Brain Development, United States
3 publications · 178 citations
4
h-index
- SC
4
h-index
- JF
3
h-index
1–5 of 330
Institutions
107
Science for Life Laboratory
Stockholm, Sweden
8 h-index
50 publications
55.5K citations
KTH Royal Institute of Technology
Stockholm, Sweden
5 h-index
26 publications
43.2K citations
Harvard University
Cambridge, United States
4 h-index
10 publications
7.7K citations
Uppsala University
Uppsala, Sweden
4 h-index
22 publications
4.6K citations
Icahn School of Medicine at Mount Sinai
New York, United States
4 h-index
4 publications
1K citations
BGI Group (China)
Shenzhen, China
4 h-index
58 publications
2.7K citations
Lieber Institute for Brain Development
Baltimore, United States
4 h-index
9 publications
404 citations
Johns Hopkins University
Baltimore, United States
4 h-index
11 publications
436 citations
1–8 of 107
Venues
- bioRxiv (Cold Spring Harbor Laboratory)
Repository · 8 publications · 220 citations
9
h-index
- Bioinformatics
8 publications · 502 citations
8
h-index
- Genome biology
3 publications · 1K citations
4
h-index
- Nucleic Acids Research
3 publications · 217 citations
3
h-index
- Nature Communications
3 publications · 154 citations
3
h-index
1–5