Concepedia

Romain Lopez

RL

Statistics

Publications

28

Citations

7.1K

H-Index

17

Active since

2018

Affiliations

University of California, Berkeley(Current)

Chan Zuckerberg Initiative (United States)

Ragon Institute of MGH, MIT and Harvard

University of Michigan

Centre de Mathématiques Appliquées de l'École polytechnique

Romain Lopez is an author at University of California, Berkeley specializing in engineering, medicine, and computational biology.

Top concepts

MedicineEngineeringBioinformaticsComputational BiologySystems BiologySingle-cell AnalysisGene ExpressionFunctional GenomicsCell BiologySingle-cell Genomics

Publications per year

2018–2025

28

Publications

28

Scrublet: Computational Identification of Cell Doublets in Single-Cell Transcriptomic Data

Samuel L. Wolock, Romain Lopez, Allon M. Klein · Cell Systems · 2019 · 2.7K citations · Full text

Systems Biology, Functional Genomics, Engineering +15

Deep generative modeling for single-cell transcriptomics

Romain Lopez, Jeffrey Regier, Michael B. Cole et al. · Nature Methods · 2018 · 2.4K citations

Single Cell Sequencing, Medicine, Computational Biology +7

Probabilistic harmonization and annotation of single‐cell transcriptomics data with deep generative models

Chenling Xu, Romain Lopez, Edouard Mehlman et al. · Molecular Systems Biology · 2021 · 617 citations · Full text

Engineering, Single‐cell Transcriptomics Data, Deep Generative Models +22

Joint probabilistic modeling of single-cell multi-omic data with totalVI

Adam Gayoso, Zoë Steier, Romain Lopez et al. · Nature Methods · 2021 · 534 citations · Full text

Joint Probabilistic Modeling, Engineering, Data Science +9

DestVI identifies continuums of cell types in spatial transcriptomics data

Romain Lopez, Baoguo Li, Hadas Keren‐Shaul et al. · Nature Biotechnology · 2022 · 220 citations · Full text

Functional Genomics, Destvi Identifies Continuums, Engineering +12

1–5 of 28