Concepedia

Single-cell Visualization

Single-Cell Visualization is a data visualization methodology in single-cell bioinformatics that produces interactive, typically low-dimensional graphical representations of high-dimensional measurements from individual cells to enable the exploration, interpretation, and communication of cellular heterogeneity and structure.

506

Publications

59K

Citations

3K

Authors

829

Institutions

Publications per year

2017–2026

303

Parents

Children

Publications

506

Dimensionality reduction for visualizing single-cell data using UMAP

Étienne Becht, Leland McInnes, John Healy et al. · Nature Biotechnology · 2018 · 5.8K citations

, , +12

Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R

Davis J. McCarthy, Kieran R. Campbell, Aaron T. L. Lun et al. · Bioinformatics · 2016 · 2.1K citations · Full text

, , +15

ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging

Martin Ovesný, Pavel Křížek, Josef Borkovec et al. · Bioinformatics · 2014 · 1.7K citations · Full text

, , +16

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

El-ad David Amir, Kara L. Davis, Michelle D. Tadmor et al. · Nature Biotechnology · 2013 · 1.6K citations · Full text

, , +12

Deep Profiling of Mouse Splenic Architecture with CODEX Multiplexed Imaging

Yury Goltsev, Nikolay Samusik, Julia Kennedy‐Darling et al. · Cell · 2018 · 1.6K citations · Full text

, , +15

1–5 of 506

Authors

3K

  1. GP
    Garry P. Nolan

    Stanford University, United States

    10 publications · 4.3K citations

    10

    h-index

  2. SF
    Steven F. Lee

    University of Cambridge, United Kingdom

    5 publications · 1.4K citations

    5

    h-index

  3. BP
    Boudewijn P. F. Lelieveldt

    Leiden University Medical Center, Netherlands

    4 publications · 916 citations

    4

    h-index

  4. DJ
    Dechen Jiang

    Nanjing University, China

    4 publications · 199 citations

    4

    h-index

  5. SB
    Sarah Black

    Stanford University, United States

    4 publications · 2.5K citations

    4

    h-index

1–5 of 3K

Institutions

829

  1. Stanford University

    Stanford, United States

    22 h-index

    128 publications

    41.1K citations

  2. Harvard University

    Cambridge, United States

    21 h-index

    151 publications

    34.2K citations

  3. Broad Institute

    Cambridge, United States

    20 h-index

    85 publications

    18.2K citations

  4. Centre National de la Recherche Scientifique

    Paris, France

    16 h-index

    72 publications

    6.3K citations

  5. Howard Hughes Medical Institute

    Chevy Chase, United States

    16 h-index

    65 publications

    16.4K citations

  6. University of Cambridge

    Cambridge, United Kingdom

    13 h-index

    79 publications

    40.5K citations

  7. Massachusetts General Hospital

    Boston, United States

    11 h-index

    36 publications

    3.4K citations

  8. California Institute of Technology

    Pasadena, United States

    11 h-index

    50 publications

    18.1K citations

1–8 of 829

Venues

  1. Nature Methods

    23 publications · 6.4K citations

    23

    h-index

  2. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 39 publications · 1.5K citations

    20

    h-index

  3. Bioinformatics

    22 publications · 6.7K citations

    19

    h-index

  4. Scientific Reports

    14 publications · 754 citations

    14

    h-index

  5. Nature Communications

    14 publications · 2.6K citations

    14

    h-index

1–5