Concepedia

Cell Annotation Visualization

Cell Annotation Visualization is a methodological framework within single-cell visualization that enables the graphical representation and interpretation of annotated cell types or states derived from high-throughput transcriptomic data, distinguished by its integration of biological metadata with spatial or pseudospatial cellular embeddings.

5

Publications

666

Citations

27

Authors

16

Institutions

Publications per year

2017–2026

3

Parents

Publications

5

Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data

Nicolas Fernandez, Gregory W. Gundersen, Adeeb Rahman et al. · Scientific Data · 2017 · 279 citations · Full text

, , +17

UCSC Cell Browser: visualize your single-cell data

Matthew L Speir, Aparna Bhaduri, Nikolay S. Markov et al. · Bioinformatics · 2021 · 279 citations · Full text

, , +17

Visualization and Analysis of 3D Microscopic Images

Fuhui Long, Jianlong Zhou · PLoS Computational Biology · 2012 · 81 citations · Full text

, , +17

UCSC Cell Browser: Visualize Your Single-Cell Data

Matthew L Speir, Aparna Bhaduri, Nikolay S. Markov et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2020 · 16 citations · Full text

, , +17

Integrating semantic annotation and information visualization for the analysis of multichannel fluorescence micrographs from pancreatic tissue

Julia Herold, Luxian Zhou, Sylvie Abouna et al. · Computerized Medical Imaging and Graphics · 2009 · 11 citations

, , +17

1–5 of 5

Authors

27

  1. MH
    Maximilian Haeussler

    University of California, Santa Cruz, United States

    2 publications · 295 citations

    2

    h-index

  2. WJ
    W. James Kent

    University of California, Santa Cruz, United States

    2 publications · 295 citations

    2

    h-index

  3. AB
    Aparna Bhaduri

    University of California, San Francisco, United States

    2 publications · 295 citations

    2

    h-index

  4. ML
    Matthew L Speir

    University of California, Santa Cruz, United States

    2 publications · 295 citations

    2

    h-index

  5. PM
    Pablo Moreno

    European Bioinformatics Institute, United Kingdom

    2 publications · 295 citations

    2

    h-index

1–5 of 27

Institutions

16

  1. Chan Zuckerberg Initiative (United States)

    Redwood City, United States

    2 h-index

    2 publications

    295 citations

  2. Northwestern University

    Evanston, United States

    2 h-index

    2 publications

    295 citations

  3. European Bioinformatics Institute

    Cambridge, United Kingdom

    2 h-index

    4 publications

    590 citations

  4. Broad Center

    Los Angeles, United States

    2 h-index

    5 publications

    606 citations

  5. University of California, Santa Cruz

    Santa Cruz, United States

    2 h-index

    9 publications

    1.5K citations

  6. University of California, San Francisco

    San Francisco, United States

    2 h-index

    5 publications

    606 citations

  7. Whitehead Institute for Biomedical Research

    Cambridge, United States

    1 h-index

    1 publications

    81 citations

  8. University of California, Los Angeles

    Los Angeles, United States

    1 h-index

    1 publications

    279 citations

1–8 of 16

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 1 publications · 16 citations

    1

    h-index

  2. PLoS Computational Biology

    1 publications · 81 citations

    1

    h-index

  3. Computerized Medical Imaging and Graphics

    CMIG · 1 publications · 11 citations

    1

    h-index

  4. Scientific Data

    1 publications · 279 citations

    1

    h-index

  5. Bioinformatics

    1 publications · 279 citations

    1

    h-index

1–5